IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1145	 39.14	-1	1385120..1385515	-	131	157960975	-	Spea_1147	-	hypothetical protein
1146	 45.93	0	1386127..1387428	-	433	157960976	-	Spea_1148	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
1147	 44.35	0	1387838..1388200	-	120	157960977	-	Spea_1149	-	hypothetical protein
1148	 47.10	0	1388659..1389813	+	384	157960978	-	Spea_1150	-	RND family efflux transporter MFP subunit
1149	 49.87	+1	1390070..1393201	+	1043	157960979	-	Spea_1151	-	hydrophobe/amphiphile efflux-1 (HAE1) family protein
1150	 47.87	0	1393696..1394844	-	382	157960980	-	Spea_1152	-	iron-containing alcohol dehydrogenase
1151	 40.09	-1	1394863..1395291	-	142	157960981	-	Spea_1153	-	hypothetical protein
1152	 46.62	0	1395486..1395959	-	157	157960982	-	Spea_1154	-	hypothetical protein
1153	 47.96	0	1396442..1399552	-	1036	157960983	-	Spea_1155	-	acriflavin resistance protein
1154	 49.15	+1	1399553..1400665	-	370	157960984	-	Spea_1156	-	RND family efflux transporter MFP subunit
1155	 45.24	0	1401104..1402186	-	360