IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1138	 45.45	0	1376318..1377142	+	274	157960968	-	Spea_1140	-	MscS mechanosensitive ion channel
1139	 43.66	0	1377216..1377854	-	212	157960969	-	Spea_1141	-	hypothetical protein
1140	 45.92	0	1378189..1379205	+	338	157960970	-	Spea_1142	-	threonine aldolase
1141	 44.82	0	1379729..1380616	-	295	157960971	-	Spea_1143	-	hypothetical protein
1142	 51.24	+1	1380744..1382351	-	535	157960972	-	Spea_1144	-	alkaline phosphatase
1143	 48.87	+1	1382441..1383940	-	499	157960973	-	Spea_1145	-	alkaline phosphatase
1144	 47.14	0	1384243..1384452	-	69	157960974	-	Spea_1146	-	hypothetical protein
1145	 39.14	-1	1385120..1385515	-	131	157960975	-	Spea_1147	-	hypothetical protein
1146	 45.93	0	1386127..1387428	-	433	157960976	-	Spea_1148	-	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
1147	 44.35	0	1387838..1388200	-	120	157960977	-	Spea_1149	-	hypothetical protein
1148	 47.10	0	1388659..1389813	+	384	157960978	-	Spea_1150	-	RND family efflux transporter