IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1124	 48.23	0	1363642..1364460	-	272	157960954	-	Spea_1126	-	pyrroline-5-carboxylate reductase
1125	 49.72	+1	1364663..1365364	-	233	157960955	-	Spea_1127	-	alanine racemase domain-containing protein
1126	 47.59	0	1365400..1366437	+	345	157960956	-	Spea_1128	-	twitching motility protein
1127	 49.24	+1	1366461..1367573	+	370	157960957	-	Spea_1129	-	twitching motility protein
1128	 49.70	+1	1367696..1368709	+	337	157960958	-	Spea_1130	-	ferrochelatase
1129	 48.59	+1	1368868..1369293	-	141	157960959	-	Spea_1131	-	Holliday junction resolvase-like protein
1130	 47.82	0	1369332..1369904	-	190	157960960	-	Spea_1132	-	hypothetical protein
1131	 44.24	0	1369917..1370246	-	109	157960961	-	Spea_1133	-	translation initiation factor Sui1
1132	 45.35	0	1370648..1370980	-	110	157960962	-	Spea_1134	-	hypothetical protein
1133	 42.83	0	1371140..1371697	+	185	157960963	-	Spea_1135	-	hypothetical protein
1134	 45.16	0	1371822..1372700	-	292	157960964	-	Spea_1136	-	Ly