IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1121	 41.61	-1	1362253..1362687	-	144	157960951	-	Spea_1123	-	hypothetical protein
1122	 46.52	0	1362771..1363043	-	90	157960952	-	Spea_1124	-	hypothetical protein
1123	 44.63	0	1363058..1363606	-	182	157960953	-	Spea_1125	-	protein of unknown function YGGT
1124	 48.23	0	1363642..1364460	-	272	157960954	-	Spea_1126	-	pyrroline-5-carboxylate reductase
1125	 49.72	+1	1364663..1365364	-	233	157960955	-	Spea_1127	-	alanine racemase domain-containing protein
1126	 47.59	0	1365400..1366437	+	345	157960956	-	Spea_1128	-	twitching motility protein
1127	 49.24	+1	1366461..1367573	+	370	157960957	-	Spea_1129	-	twitching motility protein
1128	 49.70	+1	1367696..1368709	+	337	157960958	-	Spea_1130	-	ferrochelatase
1129	 48.59	+1	1368868..1369293	-	141	157960959	-	Spea_1131	-	Holliday junction resolvase-like protein
1130	 47.82	0	1369332..1369904	-	190	157960960	-	Spea_1132	-	hypothetical protein
1131	 44.24	0	1369917..1370246	-	109	157960961	-	Spea_1133	-	tran