IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1116	 43.92	0	1355486..1356382	+	298	157960946	-	Spea_1118	-	LysR family transcriptional regulator
1117	 45.87	0	1356467..1358125	-	552	157960947	-	Spea_1119	-	cytochrome bd ubiquinol oxidase subunit I
1118	 47.51	0	1358352..1360235	-	627	157960948	-	Spea_1120	-	hypothetical protein
1119	 47.41	0	1360391..1361527	-	378	157960949	-	Spea_1121	-	putative oxygen-independent coproporphyrinogen III oxidase
1120	 47.33	0	1361527..1362126	-	199	157960950	-	Spea_1122	-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
1121	 41.61	-1	1362253..1362687	-	144	157960951	-	Spea_1123	-	hypothetical protein
1122	 46.52	0	1362771..1363043	-	90	157960952	-	Spea_1124	-	hypothetical protein
1123	 44.63	0	1363058..1363606	-	182	157960953	-	Spea_1125	-	protein of unknown function YGGT
1124	 48.23	0	1363642..1364460	-	272	157960954	-	Spea_1126	-	pyrroline-5-carboxylate reductase
1125	 49.72	+1	1364663..1365364	-	233	157960955	-	Spea_1127	-	alanine racemase domain-containing protein
1126	 47.59	0	1365400..1366437	+	345