IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1109	 46.12	0	1345820..1346734	+	304	157960939	-	Spea_1111	-	glutaminase
1110	 44.24	0	1346968..1347783	+	271	157960940	-	Spea_1112	-	hypothetical protein
1111	 45.75	0	1348137..1349078	+	313	157960941	-	Spea_1113	-	LysR family transcriptional regulator
1112	 42.08	0	1349870..1350886	+	338	157960942	-	Spea_1114	-	transposase IS116/IS110/IS902 family protein
1113	 44.44	0	1351573..1351833	+	86	157960943	-	Spea_1115	-	hypothetical protein
1114	 45.42	0	1352097..1354082	+	661	157960944	-	Spea_1116	-	hypothetical protein
1115	 48.70	+1	1354169..1355326	-	385	157960945	-	Spea_1117	-	C4-dicarboxylate transporter/malic acid transport protein
1116	 43.92	0	1355486..1356382	+	298	157960946	-	Spea_1118	-	LysR family transcriptional regulator
1117	 45.87	0	1356467..1358125	-	552	157960947	-	Spea_1119	-	cytochrome bd ubiquinol oxidase subunit I
1118	 47.51	0	1358352..1360235	-	627	157960948	-	Spea_1120	-	hypothetical protein
1119	 47.41	0	1360391..1361527	-	378	15