IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1103	 41.60	-1	1341198..1341596	+	132	157960933	-	Spea_1105	-	transposase
1104	 39.71	-1	1341680..1342432	+	250	157960934	-	Spea_1106	-	integrase catalytic region
1105	 40.50	-1	1343112..1343390	-	92	157960935	-	Spea_1107	-	hypothetical protein
1106	 46.85	0	1343393..1344457	-	354	157960936	-	Spea_1108	-	A/G-specific adenine glycosylase
1107	 46.78	0	1344730..1345443	+	237	157960937	-	Spea_1109	-	tRNA (guanine-N(7))-methyltransferase
1108	 43.12	0	1345494..1345820	+	108	157960938	-	Spea_1110	-	hypothetical protein
1109	 46.12	0	1345820..1346734	+	304	157960939	-	Spea_1111	-	glutaminase
1110	 44.24	0	1346968..1347783	+	271	157960940	-	Spea_1112	-	hypothetical protein
1111	 45.75	0	1348137..1349078	+	313	157960941	-	Spea_1113	-	LysR family transcriptional regulator
1112	 42.08	0	1349870..1350886	+	338	157960942	-	Spea_1114	-	transposase IS116/IS110/IS902 family protein
1113	 44.44	0	1351573..1351833	+	86	157960943	-	Spea_1115	-	hypothetical protein
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