IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
67	 47.75	0	80721..81143	-	140	157959897	-	Spea_0067	-	peptidoglycan hydrolase
68	 50.49	+1	81143..82273	-	376	157959898	-	Spea_0068	-	flagellar basal body P-ring protein
69	 48.30	0	82311..82985	-	224	157959899	-	Spea_0069	-	flagellar basal body L-ring protein
70	 49.11	+1	83033..83818	-	261	157959900	-	Spea_0070	-	flagellar basal-body rod protein FlgG
71	 53.44	+2	83843..84568	-	241	157959901	-	Spea_0071	-	flagellar basal-body rod protein FlgF
72	 48.88	+1	84587..85795	-	402	157959902	-	Spea_0072	-	flagellar hook protein FlgE
73	 47.58	0	85819..86478	-	219	157959903	-	Spea_0073	-	flagellar hook capping protein
74	 50.24	+1	86478..86897	-	139	157959904	-	Spea_0074	-	flagellar basal-body rod protein FlgC
75	 46.15	0	86906..87256	-	116	157959905	-	Spea_0075	-	flagellar basal body rod protein FlgB
76	 46.80	0	87320..88084	+	254	157959906	-	Spea_0076	-	SAF domain-containing protein
77	 45.26	0	88187..88471	+	94	157959907	-	Spea_0077	-	hypothetical protein
78	 46.62	0	88464