IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1093	 39.53	-1	1323545..1323883	+	112	157960923	-	Spea_1095	-	nitrogen regulatory protein P-II
1094	 43.07	0	1323979..1324995	-	338	157960924	-	Spea_1096	-	LacI family transcription regulator
1095	 45.25	0	1325416..1328025	+	869	157960925	-	Spea_1097	-	TonB-dependent receptor
1096	 45.51	0	1328192..1329718	+	508	157960926	-	Spea_1098	-	tryptophan halogenase
1097	 40.74	-1	1329785..1330513	-	242	157960927	-	Spea_1099	-	SapC family protein
1098	 46.89	0	1331282..1334002	+	906	157960928	-	Spea_1100	-	Beta-N-acetylhexosaminidase
1099	 47.38	0	1334240..1335136	+	298	157960929	-	Spea_1101	-	ATPase BadF/BadG/BcrA/BcrD type
1100	 48.50	+1	1335168..1336301	+	377	157960930	-	Spea_1102	-	N-acetylglucosamine-6-phosphate deacetylase
1101	 44.64	0	1336417..1337601	+	394	157960931	-	Spea_1103	-	hypothetical protein
1102	 44.52	0	1337892..1339205	+	437	157960932	-	Spea_1104	-	glucose/galactose transporter
1103	 41.60	-1	1341198..1341596	+	132	157960933	-	Spea_1105