IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1086	 43.33	0	1316314..1317303	+	329	157960916	-	Spea_1088	-	type IV pilus assembly protein PilW
1087	 42.24	0	1317314..1317751	+	145	157960917	-	Spea_1089	-	type IV pilus assembly protein PilX
1088	 43.04	0	1317754..1321338	+	1194	157960918	-	Spea_1090	-	type IV pilin biogenesis protein, putative
1089	 39.19	-1	1321347..1321739	+	130	157960919	-	Spea_1091	-	methylation site containing protein
1090	 38.49	-2	1321790..1322041	+	83	157960920	-	Spea_1092	-	hypothetical protein
1091	 38.18	-2	1322086..1322622	-	178	157960921	-	Spea_1093	-	type IV pilus biogenesis protein, putative
1092	 45.42	0	1322785..1323297	-	170	157960922	-	Spea_1094	-	type IV pilus biogenesis protein, putative
1093	 39.53	-1	1323545..1323883	+	112	157960923	-	Spea_1095	-	nitrogen regulatory protein P-II
1094	 43.07	0	1323979..1324995	-	338	157960924	-	Spea_1096	-	LacI family transcription regulator
1095	 45.25	0	1325416..1328025	+	869	157960925	-	Spea_1097	-	TonB-dependent receptor
1096	 45.51	0	1328192..1329718	+	508