IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1080	 43.06	0	1309724..1310659	+	311	157960910	-	Spea_1082	-	riboflavin biosynthesis protein RibF
1081	 45.31	0	1310691..1313513	+	940	157960911	-	Spea_1083	-	isoleucyl-tRNA synthetase
1082	 42.50	0	1313634..1314146	+	170	157960912	-	Spea_1084	-	lipoprotein signal peptidase
1083	 47.52	0	1314152..1314574	+	140	157960913	-	Spea_1085	-	peptidylprolyl isomerase FKBP-type
1084	 47.96	0	1314577..1315506	+	309	157960914	-	Spea_1086	-	hydroxymethylbutenyl pyrophosphate reductase
1085	 41.35	-1	1315749..1316309	+	186	157960915	-	Spea_1087	-	type IV pilus modification protein PilV
1086	 43.33	0	1316314..1317303	+	329	157960916	-	Spea_1088	-	type IV pilus assembly protein PilW
1087	 42.24	0	1317314..1317751	+	145	157960917	-	Spea_1089	-	type IV pilus assembly protein PilX
1088	 43.04	0	1317754..1321338	+	1194	157960918	-	Spea_1090	-	type IV pilin biogenesis protein, putative
1089	 39.19	-1	1321347..1321739	+	130	157960919	-	Spea_1091	-	methylation site containing protein
1090	 38.49	-2	1321790..1322041	+	83