IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1074	 46.68	0	1301193..1303559	-	788	157960904	-	Spea_1076	-	putative phosphoketolase
1075	 46.15	0	1303980..1305461	+	493	157960905	-	Spea_1077	-	amino acid carrier protein
1076	 44.44	0	1305567..1306340	+	257	157960906	-	Spea_1078	-	hypothetical protein
1077	 37.46	-2	1306950..1307264	+	104	157960907	-	Spea_1079	-	ArsR family transcriptional regulator
1078	 44.19	0	1307577..1307843	-	88	157960908	-	Spea_1080	-	30S ribosomal protein S20
1079	 44.29	0	1308099..1309658	+	519	157960909	-	Spea_1081	-	integral membrane protein MviN
1080	 43.06	0	1309724..1310659	+	311	157960910	-	Spea_1082	-	riboflavin biosynthesis protein RibF
1081	 45.31	0	1310691..1313513	+	940	157960911	-	Spea_1083	-	isoleucyl-tRNA synthetase
1082	 42.50	0	1313634..1314146	+	170	157960912	-	Spea_1084	-	lipoprotein signal peptidase
1083	 47.52	0	1314152..1314574	+	140	157960913	-	Spea_1085	-	peptidylprolyl isomerase FKBP-type
1084	 47.96	0	1314577..1315506	+	309	157960914	-	Spea_108