IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1072	 44.20	0	1298619..1299575	-	318	157960902	-	Spea_1074	-	transaldolase B
1073	 46.17	0	1299860..1300957	-	365	157960903	-	Spea_1075	-	OmpA/MotB domain-containing protein
1074	 46.68	0	1301193..1303559	-	788	157960904	-	Spea_1076	-	putative phosphoketolase
1075	 46.15	0	1303980..1305461	+	493	157960905	-	Spea_1077	-	amino acid carrier protein
1076	 44.44	0	1305567..1306340	+	257	157960906	-	Spea_1078	-	hypothetical protein
1077	 37.46	-2	1306950..1307264	+	104	157960907	-	Spea_1079	-	ArsR family transcriptional regulator
1078	 44.19	0	1307577..1307843	-	88	157960908	-	Spea_1080	-	30S ribosomal protein S20
1079	 44.29	0	1308099..1309658	+	519	157960909	-	Spea_1081	-	integral membrane protein MviN
1080	 43.06	0	1309724..1310659	+	311	157960910	-	Spea_1082	-	riboflavin biosynthesis protein RibF
1081	 45.31	0	1310691..1313513	+	940	157960911	-	Spea_1083	-	isoleucyl-tRNA synthetase
1082	 42.50	0	1313634..1314146	+	170	157960912	-	Spea_1084	-	lipoprot