IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1069	 40.76	-1	1295548..1296099	+	183	157960899	-	Spea_1071	-	hemerythrin HHE cation binding domain-containing protein
1070	 43.01	0	1296160..1296345	-	61	157960900	-	Spea_1072	-	hypothetical protein
1071	 44.81	0	1296964..1298601	-	545	157960901	-	Spea_1073	-	glucose-6-phosphate isomerase
1072	 44.20	0	1298619..1299575	-	318	157960902	-	Spea_1074	-	transaldolase B
1073	 46.17	0	1299860..1300957	-	365	157960903	-	Spea_1075	-	OmpA/MotB domain-containing protein
1074	 46.68	0	1301193..1303559	-	788	157960904	-	Spea_1076	-	putative phosphoketolase
1075	 46.15	0	1303980..1305461	+	493	157960905	-	Spea_1077	-	amino acid carrier protein
1076	 44.44	0	1305567..1306340	+	257	157960906	-	Spea_1078	-	hypothetical protein
1077	 37.46	-2	1306950..1307264	+	104	157960907	-	Spea_1079	-	ArsR family transcriptional regulator
1078	 44.19	0	1307577..1307843	-	88	157960908	-	Spea_1080	-	30S ribosomal protein S20
1079	 44.29	0	1308099..1309658	+	519	157960909	-	Spea_1