IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1066	 45.92	0	1292605..1293891	+	428	157960896	-	Spea_1068	-	threonine synthase
1067	 46.39	0	1294161..1294451	+	96	157960897	-	Spea_1069	-	hypothetical protein
1068	 46.78	0	1294467..1295321	-	284	157960898	-	Spea_1070	-	apurinic endonuclease Apn1
1069	 40.76	-1	1295548..1296099	+	183	157960899	-	Spea_1071	-	hemerythrin HHE cation binding domain-containing protein
1070	 43.01	0	1296160..1296345	-	61	157960900	-	Spea_1072	-	hypothetical protein
1071	 44.81	0	1296964..1298601	-	545	157960901	-	Spea_1073	-	glucose-6-phosphate isomerase
1072	 44.20	0	1298619..1299575	-	318	157960902	-	Spea_1074	-	transaldolase B
1073	 46.17	0	1299860..1300957	-	365	157960903	-	Spea_1075	-	OmpA/MotB domain-containing protein
1074	 46.68	0	1301193..1303559	-	788	157960904	-	Spea_1076	-	putative phosphoketolase
1075	 46.15	0	1303980..1305461	+	493	157960905	-	Spea_1077	-	amino acid carrier protein
1076	 44.44	0	1305567..1306340	+	257	157960906	-	Spea_1078	-	hypothetical