IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1059	 44.30	0	1285450..1286142	+	230	157960889	-	Spea_1061	-	cytochrome B561
1060	 40.04	-1	1286241..1286702	-	153	157960890	-	Spea_1062	-	cytochrome c class II
1061	 38.77	-1	1286927..1287202	+	91	157960891	-	Spea_1063	-	Trp operon repressor
1062	 43.70	0	1287235..1287639	-	134	157960892	-	Spea_1064	-	hypothetical protein
1063	 49.55	+1	1287793..1288452	-	219	157960893	-	Spea_1065	-	peptidylprolyl isomerase FKBP-type
1064	 47.49	0	1289165..1291630	+	821	157960894	-	Spea_1066	-	bifunctional aspartokinase I/homeserine dehydrogenase I
1065	 47.22	0	1291627..1292562	+	311	157960895	-	Spea_1067	-	homoserine kinase
1066	 45.92	0	1292605..1293891	+	428	157960896	-	Spea_1068	-	threonine synthase
1067	 46.39	0	1294161..1294451	+	96	157960897	-	Spea_1069	-	hypothetical protein
1068	 46.78	0	1294467..1295321	-	284	157960898	-	Spea_1070	-	apurinic endonuclease Apn1
1069	 40.76	-1	1295548..1296099	+	183	157960899	-	Spea_1071	-	hemerythrin HHE cation binding do