IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1051	 46.34	0	1275021..1276112	+	363	157960881	-	Spea_1053	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1052	 46.06	0	1276112..1277266	+	384	157960882	-	Spea_1054	-	bifunctional chorismate mutase/prephenate dehydrogenase
1053	 45.17	0	1277672..1279336	+	554	157960883	-	Spea_1055	-	hydroxylamine reductase
1054	 45.87	0	1279439..1280563	+	374	157960884	-	Spea_1056	-	oxidoreductase FAD-binding subunit
1055	 48.38	0	1280747..1281085	+	112	157960885	-	Spea_1057	-	hypothetical protein
1056	 43.05	0	1281133..1282419	+	428	157960886	-	Spea_1058	-	sodium/hydrogen exchanger
1057	 45.04	0	1282497..1284470	-	657	157960887	-	Spea_1059	-	chorismate mutase
1058	 41.32	-1	1284778..1285140	-	120	157960888	-	Spea_1060	-	sigma 54 modulation protein/ribosomal protein S30EA
1059	 44.30	0	1285450..1286142	+	230	157960889	-	Spea_1061	-	cytochrome B561
1060	 40.04	-1	1286241..1286702	-	153	157960890	-	Spea_1062	-	cytochrome c class II
1061	 38.77	-1	1286927..1287202	+	91	157