IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1043	 41.57	-1	1267843..1268376	+	177	157960873	-	Spea_1045	-	hypothetical protein
1044	 44.31	0	1268473..1269756	-	427	157960874	-	Spea_1046	-	hypothetical protein
1045	 46.13	0	1269902..1270690	-	262	157960875	-	Spea_1047	-	cytochrome c assembly protein
1046	 47.45	0	1271098..1272471	+	457	157960876	-	Spea_1048	-	signal recognition particle protein
1047	 48.81	+1	1272689..1272940	+	83	157960877	-	Spea_1049	-	30S ribosomal protein S16
1048	 44.26	0	1272961..1273491	+	176	157960878	-	Spea_1050	-	16S rRNA-processing protein
1049	 47.12	0	1273507..1274253	+	248	157960879	-	Spea_1051	-	tRNA (guanine-N(1)-)-methyltransferase
1050	 46.05	0	1274290..1274643	+	117	157960880	-	Spea_1052	-	50S ribosomal protein L19
1051	 46.34	0	1275021..1276112	+	363	157960881	-	Spea_1053	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1052	 46.06	0	1276112..1277266	+	384	157960882	-	Spea_1054	-	bifunctional chorismate mutase/prephenate dehydrogenase
1053	 45.17	0	1277672..1279336	+	554