IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
61	 46.98	0	74073..74453	-	126	157959891	-	Spea_0061	-	flagellar protein FliS
62	 46.23	0	74467..75885	-	472	157959892	-	Spea_0062	-	flagellar hook-associated 2 domain-containing protein
63	 45.05	0	76202..77020	-	272	157959893	-	Spea_0063	-	flagellin domain-containing protein
64	 44.86	0	77319..78350	-	343	157959894	-	Spea_0064	-	hypothetical protein
65	 47.06	0	78369..79286	-	305	157959895	-	Spea_0065	-	flagellar hook-associated protein 3
66	 45.78	0	79297..80670	-	457	157959896	-	Spea_0066	-	flagellar hook-associated protein FlgK
67	 47.75	0	80721..81143	-	140	157959897	-	Spea_0067	-	peptidoglycan hydrolase
68	 50.49	+1	81143..82273	-	376	157959898	-	Spea_0068	-	flagellar basal body P-ring protein
69	 48.30	0	82311..82985	-	224	157959899	-	Spea_0069	-	flagellar basal body L-ring protein
70	 49.11	+1	83033..83818	-	261	157959900	-	Spea_0070	-	flagellar basal-body rod protein FlgG
71	 53.44	+2	83843..84568	-	241	157959901	-	Spea_0071	-	flagellar basal-body rod protein