IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1038	 47.70	0	1262750..1263487	+	245	157960868	-	Spea_1040	-	pyridoxal phosphate biosynthetic protein PdxJ
1039	 48.74	+1	1263587..1263982	+	131	157960869	-	Spea_1041	-	holo-acyl-carrier-protein synthase
1040	 43.15	0	1263996..1264484	-	162	157960870	-	Spea_1042	-	GCN5-related N-acetyltransferase
1041	 43.95	0	1264914..1265855	-	313	157960871	-	Spea_1043	-	Dyp-type peroxidase family protein
1042	 42.97	0	1266453..1267511	+	352	157960872	-	Spea_1044	-	hypothetical protein
1043	 41.57	-1	1267843..1268376	+	177	157960873	-	Spea_1045	-	hypothetical protein
1044	 44.31	0	1268473..1269756	-	427	157960874	-	Spea_1046	-	hypothetical protein
1045	 46.13	0	1269902..1270690	-	262	157960875	-	Spea_1047	-	cytochrome c assembly protein
1046	 47.45	0	1271098..1272471	+	457	157960876	-	Spea_1048	-	signal recognition particle protein
1047	 48.81	+1	1272689..1272940	+	83	157960877	-	Spea_1049	-	30S ribosomal protein S16
1048	 44.26	0	1272961..1273491	+	176	157960878