IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1030	 45.87	0	1255104..1255709	+	201	157960860	-	Spea_1032	-	anti sigma-E protein, RseA
1031	 47.27	0	1255722..1256654	+	310	157960861	-	Spea_1033	-	sigma E regulatory protein, MucB/RseB
1032	 43.87	0	1256668..1257132	+	154	157960862	-	Spea_1034	-	positive regulator of sigma E, RseC/MucC
1033	 43.66	0	1257261..1259051	+	596	157960863	-	Spea_1035	-	GTP-binding protein LepA
1034	 44.66	0	1259192..1260109	+	305	157960864	-	Spea_1036	-	signal peptidase I
1035	 43.81	0	1260111..1260788	+	225	157960865	-	Spea_1037	-	ribonuclease III
1036	 45.52	0	1260785..1261777	+	330	157960866	-	Spea_1038	-	GTP-binding protein Era
1037	 46.38	0	1261937..1262626	+	229	157960867	-	Spea_1039	-	DNA repair protein RecO
1038	 47.70	0	1262750..1263487	+	245	157960868	-	Spea_1040	-	pyridoxal phosphate biosynthetic protein PdxJ
1039	 48.74	+1	1263587..1263982	+	131	157960869	-	Spea_1041	-	holo-acyl-carrier-protein synthase
1040	 43.15	0	1263996..1264484	-	162	157960870	-	Spea_1