IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1017	 44.32	0	1241646..1242719	-	357	157960847	-	Spea_1019	-	putative adenylate/guanylate cyclase
1018	 45.83	0	1242845..1243516	-	223	157960848	-	Spea_1020	-	DNA mismatch repair protein
1019	 43.87	0	1244208..1244729	+	173	157960849	-	Spea_1021	-	dinucleoside polyphosphate hydrolase
1020	 46.40	0	1244748..1246982	+	744	157960850	-	Spea_1022	-	phosphoenolpyruvate-protein phosphotransferase PtsP
1021	 47.69	0	1247057..1247857	+	266	157960851	-	Spea_1023	-	hypothetical protein
1022	 43.54	0	1247941..1248792	+	283	157960852	-	Spea_1024	-	thymidylate synthase
1023	 44.30	0	1249284..1250459	+	391	157960853	-	Spea_1025	-	Na+/H+ antiporter NhaA
1024	 44.27	0	1250456..1250839	+	127	157960854	-	Spea_1026	-	hypothetical protein
1025	 42.35	0	1250909..1251817	+	302	157960855	-	Spea_1027	-	transcriptional activator NhaR
1026	 43.33	0	1251978..1252217	+	79	157960856	-	Spea_1028	-	hypothetical protein
1027	 43.41	0	1252198..1252614	+	138	157960857	-	Spea_1029	-