IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1008	 42.87	0	1228104..1229078	+	324	157960838	-	Spea_1010	-	inosine/uridine-preferring nucleoside hydrolase
1009	 42.19	0	1229331..1230527	-	398	157960839	-	Spea_1011	-	ribokinase-like domain-containing protein
1010	 50.92	+1	1230944..1232353	-	469	157960840	-	Spea_1012	-	glutamate synthase subunit beta
1011	 49.36	+1	1232360..1236808	-	1482	157960841	-	Spea_1013	-	glutamate synthase subunit alpha
1012	 46.13	0	1237298..1238227	+	309	157960842	-	Spea_1014	-	putative radical SAM protein
1013	 42.08	0	1238430..1238795	+	121	157960843	-	Spea_1015	-	Hpt protein
1014	 44.23	0	1238980..1239915	+	311	157960844	-	Spea_1016	-	LysR family transcriptional regulator
1015	 43.62	0	1240325..1241053	-	242	157960845	-	Spea_1017	-	integrase catalytic region
1016	 41.41	-1	1241170..1241553	-	127	157960846	-	Spea_1018	-	transposase
1017	 44.32	0	1241646..1242719	-	357	157960847	-	Spea_1019	-	putative adenylate/guanylate cyclase
1018	 45.83	0	1242845..1243516	-	223	15796