IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
57	 45.23	0	71412..72134	-	240	157959887	-	Spea_0057	-	flagellar biosynthesis sigma factor
58	 41.23	-1	72146..72601	-	151	157959888	-	Spea_0058	-	flagellar basal body-associated protein FliL
59	 48.76	+1	72616..73788	-	390	157959889	-	Spea_0059	-	flagellar hook-length control protein
60	 45.06	0	73781..74104	-	107	157959890	-	Spea_0060	-	hypothetical protein
61	 46.98	0	74073..74453	-	126	157959891	-	Spea_0061	-	flagellar protein FliS
62	 46.23	0	74467..75885	-	472	157959892	-	Spea_0062	-	flagellar hook-associated 2 domain-containing protein
63	 45.05	0	76202..77020	-	272	157959893	-	Spea_0063	-	flagellin domain-containing protein
64	 44.86	0	77319..78350	-	343	157959894	-	Spea_0064	-	hypothetical protein
65	 47.06	0	78369..79286	-	305	157959895	-	Spea_0065	-	flagellar hook-associated protein 3
66	 45.78	0	79297..80670	-	457	157959896	-	Spea_0066	-	flagellar hook-associated protein FlgK
67	 47.75	0	80721..81143	-	140	157959897	-	Spea_0067	-	peptidoglycan hydrolase
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