IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
997	 41.54	-1	1216341..1216730	-	129	157960827	-	Spea_0999	-	hypothetical protein
998	 47.81	0	1216887..1217867	-	326	157960828	-	Spea_1000	-	cobalamin biosynthesis protein CbiB
999	 47.33	0	1217954..1218646	-	230	157960829	-	Spea_1001	-	adenosylhomocysteine nucleosidase
1000	 39.34	-1	1219028..1220359	+	443	157960830	-	Spea_1002	-	diguanylate cyclase
1001	 48.90	+1	1220434..1220889	+	151	157960831	-	Spea_1003	-	GCN5-related N-acetyltransferase
1002	 47.47	0	1220902..1221375	-	157	157960832	-	Spea_1004	-	MarR family transcriptional regulator
1003	 47.52	0	1221568..1222272	-	234	157960833	-	Spea_1005	-	hypothetical protein
1004	 46.88	0	1222292..1223509	-	405	157960834	-	Spea_1006	-	putative transporter, BCCT family protein
1005	 49.71	+1	1223842..1225539	-	565	157960835	-	Spea_1007	-	choline dehydrogenase
1006	 50.48	+1	1225549..1227012	-	487	157960836	-	Spea_1008	-	betaine aldehyde dehydrogenase
1007	 49.01	+1	1227003..1227608	-	201	157960837	-	Spea_