IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
975	 46.87	0	1189129..1191285	-	718	157960805	-	Spea_0977	-	TonB-dependent receptor
976	 46.38	0	1191649..1192713	-	354	157960806	-	Spea_0978	-	uncharacterized FlgJ-related protein-like protein
977	 46.23	0	1193085..1193495	-	136	157960807	-	Spea_0979	-	cytochrome c class I
978	 47.44	0	1193497..1193886	-	129	157960808	-	Spea_0980	-	hypothetical protein
979	 48.66	+1	1193886..1195112	-	408	157960809	-	Spea_0981	-	oxidoreductase molybdopterin binding
980	 43.30	0	1195112..1195432	-	106	157960810	-	Spea_0982	-	cytochrome c class I
981	 45.99	0	1196074..1197795	-	573	157960811	-	Spea_0983	-	chloride channel core
982	 44.15	0	1197857..1198660	+	267	157960812	-	Spea_0984	-	hypothetical protein
983	 45.30	0	1198653..1199003	+	116	157960813	-	Spea_0985	-	iron-sulfur cluster insertion protein ErpA
984	 44.53	0	1199079..1199471	-	130	157960814	-	Spea_0986	-	hypothetical protein
985	 43.57	0	1199704..1200084	-	126	157960815	-	Spea_0987	-	hypothetical protein
986	 50.28