IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
967	 49.12	+1	1179521..1180432	+	303	157960797	-	Spea_0969	-	ErfK/YbiS/YcfS/YnhG family protein
968	 43.82	0	1180629..1180895	-	88	157960798	-	Spea_0970	-	major outer membrane lipoprotein, putative
969	 48.10	0	1181112..1182350	-	412	157960799	-	Spea_0971	-	polynucleotide adenylyltransferase/metal dependent phosphohydrolase
970	 47.29	0	1182757..1184433	+	558	157960800	-	Spea_0972	-	peptidoglycan binding domain-containing protein
971	 49.40	+1	1184433..1185509	+	358	157960801	-	Spea_0973	-	general secretion pathway protein B
972	 47.36	0	1185605..1186894	-	429	157960802	-	Spea_0974	-	glutamate-1-semialdehyde-2,1-aminomutase
973	 45.39	0	1186922..1187941	-	339	157960803	-	Spea_0975	-	aspartate carbamoyltransferase
974	 46.32	0	1188205..1189020	+	271	157960804	-	Spea_0976	-	prolipoprotein diacylglyceryl transferase
975	 46.87	0	1189129..1191285	-	718	157960805	-	Spea_0977	-	TonB-dependent receptor
976	 46.38	0	1191649..1192713	-	354	157960806	-	Spea_0978	-	uncharacterized FlgJ-related protein-like protein
977	 46.23	0	1193085..1193495	-	136