IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
963	 44.63	0	1176911..1177264	+	117	157960793	-	Spea_0965	-	dihydroneopterin aldolase
964	 44.31	0	1177265..1177756	+	163	157960794	-	Spea_0966	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
965	 46.44	0	1177781..1178581	+	266	157960795	-	Spea_0967	-	undecaprenyl pyrophosphate phosphatase
966	 45.80	0	1178635..1179468	+	277	157960796	-	Spea_0968	-	rRNA (guanine-N(1)-)-methyltransferase
967	 49.12	+1	1179521..1180432	+	303	157960797	-	Spea_0969	-	ErfK/YbiS/YcfS/YnhG family protein
968	 43.82	0	1180629..1180895	-	88	157960798	-	Spea_0970	-	major outer membrane lipoprotein, putative
969	 48.10	0	1181112..1182350	-	412	157960799	-	Spea_0971	-	polynucleotide adenylyltransferase/metal dependent phosphohydrolase
970	 47.29	0	1182757..1184433	+	558	157960800	-	Spea_0972	-	peptidoglycan binding domain-containing protein
971	 49.40	+1	1184433..1185509	+	358	157960801	-	Spea_0973	-	general secretion pathway protein B
972	 47.36	0	1185605..1186894	-	429	157960802	-	Spea_0974	-	glutamate-1-semialdehyde-2,1-aminomutase
973	 45.39	0	1186922..1187941	-	339