IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
957	 44.95	0	1171207..1172937	-	576	157960787	-	Spea_0959	-	DNA primase
958	 46.40	0	1173075..1173518	-	147	157960788	-	Spea_0960	-	GatB/YqeY domain-containing protein
959	 46.30	0	1173526..1173741	-	71	157960789	-	Spea_0961	-	30S ribosomal protein S21
960	 49.85	+1	1173970..1174986	+	338	157960790	-	Spea_0962	-	metalloendopeptidase glycoprotease family
961	 46.81	0	1175061..1175735	-	224	157960791	-	Spea_0963	-	2OG-Fe(II) oxygenase
962	 51.66	+1	1176000..1176572	-	190	157960792	-	Spea_0964	-	putative glycerol-3-phosphate acyltransferase PlsY
963	 44.63	0	1176911..1177264	+	117	157960793	-	Spea_0965	-	dihydroneopterin aldolase
964	 44.31	0	1177265..1177756	+	163	157960794	-	Spea_0966	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
965	 46.44	0	1177781..1178581	+	266	157960795	-	Spea_0967	-	undecaprenyl pyrophosphate phosphatase
966	 45.80	0	1178635..1179468	+	277	157960796	-	Spea_0968	-	rRNA (guanine-N(1)-)-methyltransferase
967	 49.12	+1	1179521..1180432	+	303