IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
952	 43.54	0	1164302..1164634	+	110	157960782	-	Spea_0954	-	hypothetical protein
953	 44.14	0	1164638..1166044	+	468	157960783	-	Spea_0955	-	cytochrome c oxidase, cbb3-type, subunit I
954	 47.64	0	1166037..1166651	+	204	157960784	-	Spea_0956	-	cytochrome C oxidase mono-heme subunit/FixO
955	 44.43	0	1166653..1168824	+	723	157960785	-	Spea_0957	-	gluconate 2-dehydrogenase (acceptor)
956	 44.46	0	1169239..1171089	-	616	157960786	-	Spea_0958	-	RNA polymerase, sigma 70 subunit, RpoD
957	 44.95	0	1171207..1172937	-	576	157960787	-	Spea_0959	-	DNA primase
958	 46.40	0	1173075..1173518	-	147	157960788	-	Spea_0960	-	GatB/YqeY domain-containing protein
959	 46.30	0	1173526..1173741	-	71	157960789	-	Spea_0961	-	30S ribosomal protein S21
960	 49.85	+1	1173970..1174986	+	338	157960790	-	Spea_0962	-	metalloendopeptidase glycoprotease family
961	 46.81	0	1175061..1175735	-	224	157960791	-	Spea_0963	-	2OG-Fe(II) oxygenase
962	 51.66	+1	1176000..1176572	-	190	157960792	-	Spe