IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
52	 38.67	-1	68035..68727	+	230	157959882	-	Spea_0052	-	acylneuraminate cytidylyltransferase
53	 36.11	-2	68776..69063	-	95	157959883	-	Spea_0053	-	hypothetical protein
54	 36.81	-2	69114..69545	-	143	157959884	-	Spea_0054	-	hypothetical protein
55	 45.50	0	69530..70540	-	336	157959885	-	Spea_0055	-	OmpA/MotB domain-containing protein
56	 45.10	0	70540..71397	-	285	157959886	-	Spea_0056	-	MotA/TolQ/ExbB proton channel
57	 45.23	0	71412..72134	-	240	157959887	-	Spea_0057	-	flagellar biosynthesis sigma factor
58	 41.23	-1	72146..72601	-	151	157959888	-	Spea_0058	-	flagellar basal body-associated protein FliL
59	 48.76	+1	72616..73788	-	390	157959889	-	Spea_0059	-	flagellar hook-length control protein
60	 45.06	0	73781..74104	-	107	157959890	-	Spea_0060	-	hypothetical protein
61	 46.98	0	74073..74453	-	126	157959891	-	Spea_0061	-	flagellar protein FliS
62	 46.23	0	74467..75885	-	472	157959892	-	Spea_0062	-	flagellar hook-associated 2 domain-containing protein
63	 45.05	0	7