version 1.0
Shewanella frigidimarina NCIMB 400, complete genome - 1..4845257 4029 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3803 43.51 0 4580743..4581951 + 402 114564990 - Sfri_3840 - hypothetical protein 3804 44.42 0 4582173..4583489 + 438 114564991 - Sfri_3841 - anaerobic C4-dicarboxylate transporter 3805 39.58 0 4584098..4587283 - 1061 114564992 - Sfri_3842 - type III restriction enzyme, res subunit 3806 44.72 0 4587369..4588475 - 368 114564993 - Sfri_3843 - filamentation induced by cAMP protein Fic 3807 42.40 0 4588709..4589491 + 260 114564994 - Sfri_3844 - hypothetical protein 3808 45.98 +1 4589571..4591001 - 476 114564995 - Sfri_3845 - twin-arginine translocation pathway signal 3809 32.58 -2 4591050..4591316 - 88 114564996 - Sfri_3846 - hypothetical protein 3810 47.79 +1 4591486..4593678 - 730 114564997 - Sfri_3847 - glucosyltransferase MdoH 3811 45.60 +1 4593681..4595360 - 559 114564998 mdoG Sfri_3848 - glucan biosynthesis protein G 3812 42.18 0 4595914..4596885 + 323 114564999 - Sfri_3849 - alpha/beta hydrolase fold 3813 40.44 0 4596891..4597889 + 332 114565000 - Sfri_3850 - lipase chaperone-like protein 3814 43.82 0 4598671..4600806 + 711 114565001 - Sfri_3851 - TonB-dependent siderophore receptor 3815 42.31 0 4601031..4602434 - 467 114565002 - Sfri_3852 - methyl-accepting chemotaxis sensory transducer 3816 40.94 0 4602762..4603550 - 262 114565003 - Sfri_3853 - transcriptional regulator, AraC family protein 3817 44.91 0 4603654..4604862 + 402 114565004 - Sfri_3854 - major facilitator transporter 3818 44.08 0 4605045..4605593 - 182 114565005 - Sfri_3855 - HPP family protein 3819 39.71 0 4605757..4606665 - 302 114565006 - Sfri_3856 - hypothetical protein 3820 47.46 +1 4606677..4607504 - 275 114565007 - Sfri_3857 - hypothetical protein 3821 43.59 0 4607572..4608429 + 285 114565008 - Sfri_3858 - hypothetical protein 3822 46.42 +1 4608785..4610221 - 478 114565009 - Sfri_3859 - peptidase M28 3823 44.24 0 4610238..4611227 - 329 114565010 - Sfri_3860 - lytic transglycosylase, catalytic 3824 44.44 0 4611232..4611771 - 179 114565011 - Sfri_3861 - hypothetical protein 3825 44.87 0 4612190..4615345 - 1051 114565012 - Sfri_3862 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein 3826 44.39 0 4615355..4616503 - 382 114565013 - Sfri_3863 - RND family efflux transporter MFP subunit 3827 42.43 0 4616831..4617940 - 369 114565014 - Sfri_3864 - outer membrane protein RomA 3828 41.59 0 4618037..4618654 + 205 114565015 - Sfri_3865 - transcriptional regulator, TetR family protein 3829 43.96 0 4618672..4619358 - 228 114565016 - Sfri_3866 - 3-methyladenine DNA glycosylase 3830 36.72 -1 4619456..4619986 - 176 114565017 - Sfri_3867 - hypothetical protein 3831 47.34 +1 4620527..4621183 + 218 114565018 ribB Sfri_3868 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3832 41.44 0 4621838..4622701 - 287 114565019 - Sfri_3869 - hypothetical protein 3833 43.81 0 4622717..4622926 - 69 114565020 - Sfri_3870 - transcriptional regulator, XRE family protein 3834 39.18 0 4622926..4623507 - 193 114565021 - Sfri_3871 - hypothetical protein 3835 39.22 0 4623840..4624196 + 118 114565022 - Sfri_3872 - transcriptional regulator, MerR family protein 3836 43.12 0 4624255..4624632 + 125 114565023 - Sfri_3873 - carboxymuconolactone decarboxylase 3837 44.22 0 4624770..4626809 - 679 114565024 - Sfri_3874 - oligopeptidase A 3838 43.33 0 4627162..4627941 + 259 114565025 - Sfri_3875 - hypothetical protein 3839 44.07 0 4628020..4628550 + 176 114565026 - Sfri_3876 - hypothetical protein 3840 46.61 +1 4628628..4629983 + 451 114565027 - Sfri_3877 - glutathione reductase 3841 40.39 0 4630202..4631236 - 344 114565028 - Sfri_3878 - integrase catalytic subunit 3842 41.70 0 4631273..4632874 - 533 114565029 - Sfri_3879 - sodium/sulphate symporter 3843 39.94 0 4633200..4633835 + 211 114565030 - Sfri_3880 - hypothetical protein 3844 41.40 0 4633893..4634363 + 156 114565031 - Sfri_3881 - adenylate cyclase 3845 40.68 0 4635124..4636470 + 448 114565032 - Sfri_3882 - phosphate-selective porin O and P 3846 39.13 0 4636483..4637310 + 275 114565033 - Sfri_3883 - hypothetical protein 3847 39.76 0 4637392..4638060 + 222 114565034 - Sfri_3884 - hypothetical protein 3848 43.20 0 4638072..4639115 + 347 114565035 - Sfri_3885 - phosphate transporter 3849 43.46 0 4639219..4639524 - 101 114565036 - Sfri_3886 - hypothetical protein 3850 43.84 0 4639521..4642574 - 1017 114565037 - Sfri_3887 - heavy metal efflux pump, CzcA family protein 3851 43.63 0 4642576..4643604 - 342 114565038 - Sfri_3888 - hypothetical protein 3852 41.07 0 4643601..4644905 - 434 114565039 - Sfri_3889 - hypothetical protein 3853 38.48 -1 4644973..4645497 + 174 114565040 - Sfri_3890 - transcriptional regulator, LuxR family protein 3854 42.20 0 4645694..4646347 - 217 114565041 - Sfri_3891 - putative transcriptional regulator, TetR family protein 3855 42.45 0 4646469..4647335 + 288 114565042 - Sfri_3892 - transcriptional regulator, LysR family protein 3856 45.24 +1 4647426..4648727 - 433 114565043 - Sfri_3893 - anaerobic c4-dicarboxylate antiporter, Dcu family protein 3857 38.48 -1 4649032..4650159 - 375 114565044 - Sfri_3894 - hypothetical protein 3858 39.47 0 4650200..4651453 - 417 114565045 - Sfri_3895 - hypothetical protein 3859 38.42 -1 4651762..4652115 - 117 114565046 - Sfri_3896 - tetraheme cytochrome c 3860 43.85 0 4652144..4653664 - 506 114565047 - Sfri_3897 - flavocytochrome c 3861 43.09 0 4653921..4654853 + 310 114565048 - Sfri_3898 - hypothetical protein 3862 43.83 0 4655033..4655842 + 269 114565049 - Sfri_3899 - hypothetical protein 3863 43.61 0 4655868..4656626 + 252 114565050 - Sfri_3900 - hypothetical protein 3864 43.36 0 4656670..4657347 + 225 114565051 - Sfri_3901 - two component transcriptional regulator, winged helix family protein 3865 43.70 0 4657311..4658651 + 446 114565052 - Sfri_3902 - periplasmic sensor signal transduction histidine kinase 3866 45.18 0 4658728..4660263 - 511 114565053 - Sfri_3903 - transcriptional regulator, XRE family protein 3867 42.97 0 4660411..4660929 + 172 114565054 - Sfri_3904 - malate synthase 3868 43.92 0 4661078..4662541 - 487 114565055 - Sfri_3905 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3869 44.49 0 4662715..4664157 - 480 114565056 - Sfri_3906 - transcriptional regulator, Fis family protein 3870 41.98 0 4664334..4664900 - 188 114565057 - Sfri_3907 - paraquat-inducible protein A 3871 42.56 0 4665127..4665798 + 223 114565058 - Sfri_3908 - hypothetical protein 3872 41.01 0 4665800..4668130 + 776 114565059 - Sfri_3909 - diguanylate cyclase/phosphodiesterase 3873 42.82 0 4668130..4668972 + 280 114565060 - Sfri_3910 - hypothetical protein 3874 39.58 0 4668972..4669403 + 143 114565061 - Sfri_3911 - globin 3875 39.70 0 4669435..4670628 - 397 114565062 - Sfri_3912 - metal dependent phosphohydrolase 3876 42.30 0 4670949..4672331 + 460 114565063 - Sfri_3913 - isochorismate synthases 3877 42.29 0 4672636..4673316 + 226 114565064 - Sfri_3914 - hypothetical protein 3878 40.56 0 4674010..4676154 - 714 114565065 - Sfri_3915 - periplasmic sensor signal transduction histidine kinase 3879 44.20 0 4676157..4677545 - 462 114565066 - Sfri_3916 - two component, sigma54 specific, transcriptional regulator, Fis family protein 3880 41.09 0 4677840..4678664 + 274 114565067 - Sfri_3917 - putative sulfate transport system substrate-binding protein 3881 43.79 0 4678661..4679368 + 235 114565068 - Sfri_3918 - binding-protein-dependent transport systems inner membrane component 3882 43.33 0 4679370..4680119 + 249 114565069 - Sfri_3919 - ABC transporter related 3883 43.15 0 4680103..4680693 + 196 114565070 - Sfri_3920 - molybdopterin-guanine dinucleotide biosynthesis protein A 3884 44.55 0 4680711..4682528 + 605 114565071 - Sfri_3921 - molybdopterin-guanine dinucleotide biosynthesis protein B 3885 43.97 0 4682537..4683523 + 328 114565072 - Sfri_3922 - molybdenum cofactor biosynthesis protein A 3886 39.43 0 4683630..4684088 + 152 114565073 - Sfri_3923 - hypothetical protein 3887 44.98 0 4684098..4684913 + 271 114565074 - Sfri_3924 - formamidopyrimidine-DNA glycosylase 3888 42.73 0 4685008..4686507 - 499 114565075 - Sfri_3925 - hypothetical protein 3889 42.80 0 4686512..4687018 - 168 114565076 coaD Sfri_3926 - phosphopantetheine adenylyltransferase 3890 36.39 -1 4687124..4687876 - 250 114565077 - Sfri_3927 - glycosyl transferase family protein 3891 38.32 -1 4688380..4689381 + 333 114565078 - Sfri_3928 - ADP-heptose--lipooligosaccharide heptosyltransferase III 3892 40.15 0 4689438..4690391 + 317 114565079 - Sfri_3929 - ADP-L-glycero-D-manno-heptose-6-epimerase 3893 35.62 -2 4690492..4690884 - 130 114565080 - Sfri_3930 - cytidyltransferase-like protein 3894 37.77 -1 4690893..4691951 - 352 114565081 - Sfri_3931 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 3895 37.19 -1 4692170..4693285 + 371 114565082 - Sfri_3932 - ADP-heptose:LPS heptosyltransferase-like protein 3896 36.28 -1 4693327..4694175 + 282 114565083 - Sfri_3933 - glycosyl transferase family protein 3897 46.61 +1 4694218..4695249 - 343 114565084 - Sfri_3934 - glycosyl transferase family protein 3898 44.44 0 4695360..4696088 + 242 114565085 - Sfri_3935 - 3-deoxy-D-manno-octulosonic-acid kinase 3899 43.71 0 4696178..4697440 - 420 114565086 - Sfri_3936 - 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 3900 39.67 0 4697558..4698220 + 220 114565087 - Sfri_3937 - transcriptional regulator, TetR family protein 3901 44.47 0 4698548..4699741 + 397 114565088 - Sfri_3938 - 2-amino-3-ketobutyrate coenzyme A ligase 3902 43.96 0 4699828..4700853 + 341 114565089 tdh Sfri_3939 - L-threonine 3-dehydrogenase 42.09 MEAN 3.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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