version 1.0
Shewanella frigidimarina NCIMB 400, complete genome - 1..4845257 4029 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3560 44.25 0 4268147..4269154 + 335 114564747 - Sfri_3595 - hypothetical protein 3561 45.80 +1 4269258..4271021 - 587 114564748 - Sfri_3596 - twin-arginine translocation pathway signal 3562 42.55 0 4271344..4271766 + 140 114564749 - Sfri_3597 - OsmC family protein 3563 46.49 +1 4271900..4272910 - 336 114564750 - Sfri_3598 - luciferase family protein 3564 37.71 -1 4273000..4273524 - 174 114564751 - Sfri_3599 - hypothetical protein 3565 43.62 0 4273718..4274485 - 255 114564752 - Sfri_3600 - short-chain dehydrogenase/reductase SDR 3566 36.31 -1 4274591..4274926 + 111 114564753 - Sfri_3601 - transcriptional regulator, HxlR family protein 3567 43.45 0 4274972..4276444 - 490 114564754 - Sfri_3602 - RNA-metabolising metallo-beta-lactamase 3568 42.35 0 4276814..4278022 + 402 114564755 - Sfri_3603 - porin 3569 43.96 0 4278189..4278734 - 181 114564756 - Sfri_3604 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 3570 47.43 +1 4279047..4280387 - 446 114564757 - Sfri_3605 - amidohydrolase 3571 40.38 0 4280546..4281070 + 174 114564758 - Sfri_3606 - GCN5-related N-acetyltransferase 3572 39.45 0 4281646..4283508 + 620 114564759 - Sfri_3607 - diguanylate cyclase/phosphodiesterase with GAF sensor 3573 43.48 0 4283613..4284824 - 403 114564760 - Sfri_3608 - oxidoreductase FAD-binding subunit 3574 42.98 0 4284938..4286596 - 552 114564761 - Sfri_3609 - hydroxylamine reductase 3575 43.36 0 4286968..4287954 - 328 114564762 - Sfri_3610 - hypothetical protein 3576 44.35 0 4288242..4288931 + 229 114564763 - Sfri_3611 - hypothetical protein 3577 37.16 -1 4289033..4289293 - 86 114564764 - Sfri_3612 - hypothetical protein 3578 45.20 0 4289579..4291735 + 718 114564765 - Sfri_3613 - peptidyl-dipeptidase Dcp 3579 33.69 -2 4292507..4293628 + 373 114564766 - Sfri_3614 - hypothetical protein 3580 42.31 0 4293862..4294674 - 270 114564767 - Sfri_3615 - integrase catalytic subunit 3581 42.95 0 4294728..4295039 - 103 114564768 - Sfri_3616 - transposase IS3/IS911 family protein 3582 34.25 -2 4295394..4296050 + 218 114564769 - Sfri_3617 - hypothetical protein 3583 40.52 0 4296382..4296840 + 152 114564770 - Sfri_3618 - hypothetical protein 3584 41.78 0 4296854..4297303 + 149 114564771 - Sfri_3619 - hypothetical protein 3585 41.15 0 4297528..4297719 + 63 114564772 - Sfri_3620 - hypothetical protein 3586 43.05 0 4297940..4298536 - 198 114564773 - Sfri_3621 - DSBA oxidoreductase 3587 43.54 0 4299034..4300797 - 587 114564774 - Sfri_3622 - band 7 protein 3588 42.72 0 4300892..4301530 - 212 114564775 - Sfri_3623 - hypothetical protein 3589 42.55 0 4301903..4302781 - 292 114564776 - Sfri_3624 - alpha/beta hydrolase fold 3590 44.76 0 4303177..4303920 + 247 114564777 - Sfri_3625 - hypothetical protein 3591 45.71 +1 4303980..4304609 + 209 114564778 - Sfri_3626 - flavoprotein oxygenase 3592 43.23 0 4304692..4305681 + 329 114564779 - Sfri_3627 - hypothetical protein 3593 41.99 0 4305902..4307068 + 388 114564780 - Sfri_3628 - diguanylate cyclase 3594 39.48 0 4307134..4307637 - 167 114564781 - Sfri_3629 - glycine cleavage system regulatory protein-like protein 3595 43.65 0 4308330..4308959 + 209 114564782 - Sfri_3630 - GPR1/FUN34/yaaH family protein 3596 40.46 0 4309027..4309545 - 172 114564783 - Sfri_3631 - hypothetical protein 3597 41.98 0 4309550..4310347 - 265 114564784 - Sfri_3632 - response regulator receiver protein 3598 45.99 +1 4310807..4311628 + 273 114564785 - Sfri_3633 - cytochrome c, putative 3599 43.93 0 4311639..4312223 + 194 114564786 - Sfri_3634 - hypothetical protein 3600 42.84 0 4312473..4314566 - 697 114564787 - Sfri_3635 - prolyl oligopeptidase 3601 43.01 0 4314795..4315073 + 92 114564788 - Sfri_3636 - PpiC-type peptidyl-prolyl cis-trans isomerase 3602 44.90 0 4315248..4315973 - 241 114564789 - Sfri_3637 - hypothetical protein 3603 43.68 0 4316217..4318043 + 608 114564790 - Sfri_3638 - peptidase S8 and S53, subtilisin, kexin, sedolisin 3604 37.53 -1 4318432..4319193 - 253 114564791 - Sfri_3639 - hypothetical protein 3605 41.27 0 4319604..4319855 + 83 114564792 - Sfri_3640 - hypothetical protein 3606 36.27 -1 4319937..4320956 - 339 114564793 - Sfri_3641 - hypothetical protein 3607 36.34 -1 4320961..4323192 - 743 114564794 - Sfri_3642 - peptidase domain-containing protein 3608 43.70 0 4323288..4323779 - 163 114564795 - Sfri_3643 - transcriptional regulator, MarR family protein 3609 44.78 0 4323926..4324807 + 293 114564796 - Sfri_3644 - hypothetical protein 3610 41.72 0 4324852..4325364 - 170 114564797 - Sfri_3645 - putative lipoprotein 3611 45.74 +1 4325520..4325906 - 128 114564798 - Sfri_3646 - carboxymuconolactone decarboxylase 3612 44.72 0 4326215..4326829 + 204 114564799 - Sfri_3647 - cold-shock DNA-binding domain-containing protein 3613 44.51 0 4326972..4327973 - 333 114564800 - Sfri_3648 - transcriptional regulator, AraC family protein 3614 43.01 0 4328194..4329660 + 488 114564801 - Sfri_3649 - flavin-containing monooxygenase FMO 3615 43.45 0 4329749..4330519 + 256 114564802 - Sfri_3650 - short-chain dehydrogenase/reductase SDR 3616 43.76 0 4330564..4331685 + 373 114564803 - Sfri_3651 - alpha/beta hydrolase domain-containing protein 3617 39.43 0 4331882..4332160 + 92 114564804 - Sfri_3652 - hypothetical protein 3618 41.20 0 4332446..4333195 - 249 114564805 - Sfri_3653 - methyltransferase type 12 3619 44.30 0 4333711..4334157 - 148 114564806 - Sfri_3654 - hypothetical protein 3620 40.29 0 4334432..4334920 + 162 114564807 - Sfri_3655 - hypothetical protein 3621 41.77 0 4334985..4335221 - 78 114564808 - Sfri_3656 - transcriptional regulator, XRE family protein 3622 41.57 0 4335461..4336516 + 351 114564809 - Sfri_3657 - NERD domain-containing protein 3623 37.45 -1 4336551..4337279 + 242 114564810 - Sfri_3658 - hypothetical protein 3624 33.63 -2 4337530..4339533 - 667 114564811 - Sfri_3659 - ATPase, putative 3625 44.44 0 4339965..4341602 - 545 114564812 groEL Sfri_3660 - chaperonin GroEL 3626 44.33 0 4341660..4341950 - 96 114564813 groES Sfri_3661 - co-chaperonin GroES 3627 45.07 0 4342165..4343595 + 476 114564814 - Sfri_3662 - MATE efflux family protein 3628 46.03 +1 4343686..4344063 + 125 114564815 - Sfri_3663 - hypothetical protein 3629 41.82 0 4344259..4344906 - 215 114564816 - Sfri_3664 - FxsA cytoplasmic membrane protein 3630 42.51 0 4345135..4345461 + 108 114564817 - Sfri_3665 - CutA1 divalent ion tolerance protein 3631 42.18 0 4345434..4347320 + 628 114564818 dipZ Sfri_3666 - thiol:disulfide interchange protein precursor 3632 43.09 0 4347773..4349443 + 556 114564819 - Sfri_3667 - sodium/hydrogen exchanger 3633 44.71 0 4349616..4350758 + 380 114564820 - Sfri_3668 - galactokinase 3634 45.51 +1 4350784..4351818 + 344 114564821 - Sfri_3669 - aldose 1-epimerase 3635 41.79 0 4351808..4352221 + 137 114564822 - Sfri_3670 - hypothetical protein 3636 41.55 0 4352340..4352777 - 145 114564823 - Sfri_3671 - hypothetical protein 3637 47.93 +1 4353154..4354167 - 337 114564824 - Sfri_3672 - alcohol dehydrogenase 3638 41.67 0 4354363..4355154 + 263 114564825 - Sfri_3673 - putative cation efflux protein 3639 47.22 +1 4355323..4357050 - 575 114564826 - Sfri_3674 - putative sulfate transporter YchM 3640 42.24 0 4357338..4358594 - 418 114564827 - Sfri_3675 - periplasmic sensor signal transduction histidine kinase 3641 45.17 0 4358653..4359345 - 230 114564828 - Sfri_3676 - two component transcriptional regulator, winged helix family protein 3642 44.88 0 4359366..4362527 - 1053 114564829 - Sfri_3677 - acriflavin resistance protein 3643 46.27 +1 4362530..4363750 - 406 114564830 - Sfri_3678 - RND family efflux transporter MFP subunit 3644 46.37 +1 4363740..4365143 - 467 114564831 - Sfri_3679 - RND efflux system, outer membrane lipoprotein, NodT family protein 3645 39.60 0 4365418..4366326 - 302 114564832 - Sfri_3680 - haloalkane dehalogenase 3646 31.10 -2 4366530..4366976 - 148 114564833 - Sfri_3681 - hypothetical protein 3647 35.61 -2 4366991..4367650 - 219 114564834 - Sfri_3682 - cytoplasmic chaperone TorD family protein 3648 40.87 0 4367708..4368370 - 220 114564835 - Sfri_3683 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3649 41.08 0 4368385..4370901 - 838 114564836 - Sfri_3684 - anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein 3650 40.00 0 4370935..4372944 - 669 114564837 - Sfri_3685 - outer membrane protein 3651 42.86 0 4372959..4373903 - 314 114564838 - Sfri_3686 - cytochrome C family protein 3652 29.94 -2 4374348..4375142 + 264 114564839 - Sfri_3687 - hypothetical protein 3653 43.15 0 4375464..4376849 - 461 114564840 - Sfri_3688 - two component, sigma54 specific, transcriptional regulator, Fis family protein 3654 42.23 0 4376853..4378820 - 655 114564841 - Sfri_3689 - periplasmic sensor signal transduction histidine kinase 3655 44.92 0 4379265..4381016 + 583 114564842 - Sfri_3690 - flavocytochrome c 3656 43.87 0 4381420..4381827 + 135 114564843 - Sfri_3691 - glyoxalase/bleomycin resistance protein/dioxygenase 3657 43.70 0 4382030..4383283 - 417 114564844 - Sfri_3692 - outer membrane porin 3658 43.70 0 4383349..4383705 - 118 114564845 - Sfri_3693 - hypothetical protein 3659 44.35 0 4383773..4385452 - 559 114564846 - Sfri_3694 - twin-arginine translocation pathway signal 42.09 MEAN 3.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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