version 1.0
Shewanella frigidimarina NCIMB 400, complete genome - 1..4845257 4029 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2644 42.03 0 3201469..3202641 - 390 114563832 - Sfri_2666 - major facilitator transporter 2645 44.75 0 3202641..3203735 - 364 114563833 - Sfri_2667 - chorismate synthase 2646 40.21 0 3203792..3204736 - 314 114563834 - Sfri_2668 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2647 43.56 0 3204816..3205343 + 175 114563835 - Sfri_2669 - hypothetical protein 2648 43.67 0 3205436..3205909 - 157 114563836 - Sfri_2670 - phosphohistidine phosphatase, SixA 2649 40.00 0 3206098..3208887 + 929 114563837 - Sfri_2671 - peptidase M16 domain-containing protein 2650 33.36 -2 3209135..3213490 + 1451 114563838 - Sfri_2672 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 2651 41.84 0 3213513..3214394 + 293 114563839 - Sfri_2673 - hypothetical protein 2652 35.90 -1 3214405..3214521 + 38 114565217 - Sfri_4067 - hypothetical protein 2653 39.91 0 3214631..3214843 - 70 114563840 - Sfri_2675 - hypothetical protein 2654 42.19 0 3215158..3217290 - 710 114563841 fadJ Sfri_2676 - multifunctional fatty acid oxidation complex subunit alpha 2655 44.47 0 3217290..3218600 - 436 114563842 fadI Sfri_2677 - 3-ketoacyl-CoA thiolase 2656 45.04 0 3218850..3219806 + 318 114563843 - Sfri_2678 - ATPase 2657 44.55 0 3219848..3220783 + 311 114563844 - Sfri_2679 - hypothetical protein 2658 41.17 0 3220784..3221332 + 182 114563845 - Sfri_2680 - hypothetical protein 2659 41.49 0 3221326..3222330 + 334 114563846 - Sfri_2681 - von Willebrand factor, type A 2660 41.88 0 3222330..3224435 + 701 114563847 - Sfri_2682 - TPR repeat-containing protein 2661 42.75 0 3224429..3226063 + 544 114563848 - Sfri_2683 - hypothetical protein 2662 42.20 0 3226165..3226728 + 187 114563849 - Sfri_2684 - RNA polymerase sigma factor 2663 39.55 0 3226721..3227428 + 235 114563850 - Sfri_2685 - hypothetical protein 2664 42.44 0 3227563..3229023 + 486 114563851 - Sfri_2686 - sodium/proline symporter 2665 42.37 0 3229445..3230728 + 427 114563852 - Sfri_2687 - membrane protein involved in aromatic hydrocarbon degradation 2666 40.96 0 3230929..3231990 + 353 114563853 - Sfri_2688 - RND family efflux transporter MFP subunit 2667 42.56 0 3231996..3235256 + 1086 114563854 - Sfri_2689 - acriflavin resistance protein 2668 38.03 -1 3235301..3235513 + 70 114563855 - Sfri_2690 - hypothetical protein 2669 44.18 0 3235527..3235904 + 125 114563856 - Sfri_2691 - rhodanese domain-containing protein 2670 44.49 0 3236368..3238824 + 818 114563857 - Sfri_2692 - peptidase S8 and S53, subtilisin, kexin, sedolisin 2671 38.89 -1 3238906..3239553 - 215 114563858 - Sfri_2693 - CBS domain-containing protein 2672 41.34 0 3239741..3240277 - 178 114563859 - Sfri_2694 - YaeQ family protein 2673 42.87 0 3240357..3241268 - 303 114563860 - Sfri_2695 - siroheme synthase 2674 42.50 0 3241277..3241636 - 119 114563861 - Sfri_2696 - rhodanese domain-containing protein 2675 44.24 0 3242024..3242344 - 106 114563862 - Sfri_2697 - hypothetical protein 2676 39.30 0 3242551..3242952 + 133 114563863 - Sfri_2698 - hypothetical protein 2677 41.98 0 3243220..3244167 - 315 114563864 secF Sfri_2699 - preprotein translocase subunit SecF 2678 44.46 0 3244182..3246032 - 616 114563865 secD Sfri_2700 - preprotein translocase subunit SecD 2679 38.74 -1 3246050..3246382 - 110 114563866 yajC Sfri_2701 - preprotein translocase subunit YajC 2680 42.31 0 3246408..3247532 - 374 114563867 tgt Sfri_2702 - queuine tRNA-ribosyltransferase 2681 43.23 0 3247675..3248715 - 346 114563868 - Sfri_2703 - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase 2682 38.69 -1 3249167..3249763 + 198 114563869 - Sfri_2704 - hypothetical protein 2683 42.10 0 3249793..3250374 + 193 114563870 - Sfri_2705 - redoxin domain-containing protein 2684 40.98 0 3250526..3251179 + 217 114563871 - Sfri_2706 - pseudouridine synthase 2685 41.63 0 3251637..3252878 - 413 114563872 - Sfri_2707 - serine/threonine transporter SstT 2686 40.42 0 3253383..3254285 - 300 114563873 - Sfri_2708 - response regulator receiver modulated CheW protein 2687 42.08 0 3254784..3255263 - 159 114563874 - Sfri_2709 - dual specificity protein phosphatase 2688 43.59 0 3255275..3256561 - 428 114563875 - Sfri_2710 - DEAD/DEAH box helicase domain-containing protein 2689 45.11 0 3256634..3257185 - 183 114563876 - Sfri_2711 - methylated-DNA--protein-cysteine methyltransferase 2690 40.95 0 3257190..3258725 - 511 114563877 - Sfri_2712 - transcriptional regulator, AraC family protein 2691 42.02 0 3258938..3260767 + 609 114563878 - Sfri_2713 - ABC transporter related 2692 40.57 0 3261885..3263294 + 469 114563879 - Sfri_2714 - glutamyl-tRNA synthetase 2693 38.53 -1 3265560..3266579 + 339 114563880 - Sfri_2715 - TRAP dicarboxylate transporter, DctP subunit 2694 38.03 -1 3266603..3267304 + 233 114563881 - Sfri_2716 - tripartite ATP-independent periplasmic transporter DctQ 2695 41.06 0 3267304..3268701 + 465 114563882 - Sfri_2717 - TRAP dicarboxylate transporter, DctM subunit 2696 40.18 0 3268802..3270598 + 598 114563883 - Sfri_2718 - periplasmic sensor signal transduction histidine kinase 2697 42.14 0 3270601..3271974 + 457 114563884 - Sfri_2719 - two component, sigma54 specific, transcriptional regulator, Fis family protein 2698 41.83 0 3271971..3273206 - 411 114563885 - Sfri_2720 - major facilitator transporter 2699 37.56 -1 3273309..3273710 - 133 114563886 - Sfri_2721 - hypothetical protein 2700 44.48 0 3273720..3274580 - 286 114563887 - Sfri_2722 - acyl-CoA thioesterase II 2701 44.07 0 3274788..3275681 + 297 114563888 - Sfri_2723 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2702 43.92 0 3275752..3277281 - 509 114563889 - Sfri_2724 - 6-phosphogluconate dehydrogenase 2703 45.02 0 3277535..3279451 - 638 114563890 - Sfri_2725 - AMP-dependent synthetase and ligase 2704 41.12 0 3279770..3280180 + 136 114563891 - Sfri_2726 - transcriptional regulator, MerR family protein 2705 45.30 +1 3280306..3281475 + 389 114563892 - Sfri_2727 - isovaleryl-CoA dehydrogenase 2706 47.95 +1 3281564..3283171 + 535 114563893 - Sfri_2728 - propionyl-CoA carboxylase 2707 46.62 +1 3283210..3284022 + 270 114563894 - Sfri_2729 - enoyl-CoA hydratase/isomerase 2708 46.53 +1 3284025..3286055 + 676 114563895 - Sfri_2730 - carbamoyl-phosphate synthase L chain, ATP-binding 2709 47.81 +1 3286056..3286946 + 296 114563896 - Sfri_2731 - pyruvate carboxyltransferase 2710 44.96 0 3287013..3287717 + 234 114563897 - Sfri_2732 - 3-oxoacid CoA-transferase, A subunit 2711 45.51 +1 3287731..3288387 + 218 114563898 - Sfri_2733 - 3-oxoacid CoA-transferase, B subunit 2712 40.93 0 3288526..3289407 - 293 114563899 - Sfri_2734 - hypothetical protein 2713 40.58 0 3290639..3291190 + 183 114563900 - Sfri_2735 - cation antiporter 2714 49.10 +2 3291369..3291647 + 92 114563901 - Sfri_2736 - multiple resistance and pH regulation protein F 2715 50.00 +2 3291634..3291933 + 99 114563902 - Sfri_2737 - putative monovalent cation/H+ antiporter subunit G 2716 48.35 +2 3291921..3292253 + 110 114563903 - Sfri_2738 - hypothetical protein 2717 51.90 +2 3292427..3293083 + 218 114563904 - Sfri_2739 - hypothetical protein 2718 42.72 0 3293083..3293391 + 102 114563905 - Sfri_2740 - NADH-ubiquinone oxidoreductase, chain 4L 2719 51.35 +2 3293681..3295129 + 482 114563906 - Sfri_2741 - NADH dehydrogenase (quinone) 2720 51.54 +2 3295126..3296619 + 497 114563907 - Sfri_2742 - NADH dehydrogenase (quinone) 2721 51.23 +2 3296619..3297920 + 433 114563908 - Sfri_2743 - formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein 2722 43.89 0 3298451..3300241 + 596 114563909 - Sfri_2744 - acyl-CoA dehydrogenase domain-containing protein 2723 41.11 0 3300316..3300894 - 192 114563910 - Sfri_2745 - thymidine kinase 2724 42.32 0 3301054..3302610 - 518 114563911 - Sfri_2746 - Na+/H+ antiporter NhaC 2725 44.70 0 3303312..3304235 - 307 114563912 - Sfri_2747 - electron transfer flavoprotein, alpha subunit 2726 43.07 0 3304237..3304986 - 249 114563913 - Sfri_2748 - electron transfer flavoprotein beta-subunit 2727 38.20 -1 3305422..3305832 + 136 114563914 - Sfri_2749 - histone family protein nucleoid-structuring protein H-NS 2728 38.89 -1 3305995..3306390 + 131 114563915 - Sfri_2750 - putative lipoprotein 2729 40.43 0 3306504..3307292 + 262 114563916 - Sfri_2751 - hypothetical protein 2730 44.72 0 3307297..3307911 + 204 114563917 - Sfri_2752 - hexapaptide repeat-containing transferase 2731 44.46 0 3308026..3309741 + 571 114563918 - Sfri_2753 - prolyl-tRNA synthetase 2732 38.62 -1 3309807..3311207 - 466 114563919 - Sfri_2754 - GAF sensor signal transduction histidine kinase 2733 40.31 0 3311182..3312744 - 520 114563920 - Sfri_2755 - response regulator receiver modulated metal dependent phosphohydrolase 2734 38.71 -1 3313102..3314235 + 377 114563921 - Sfri_2756 - patatin 2735 39.81 0 3314537..3314968 + 143 114563922 - Sfri_2757 - hypothetical protein 2736 39.30 0 3315042..3315929 + 295 114563923 - Sfri_2758 - glucose-1-phosphate thymidylyltransferase 2737 40.35 0 3315916..3316485 + 189 114563924 - Sfri_2759 - dTDP-4-dehydrorhamnose 3,5-epimerase 2738 40.60 0 3316482..3317513 + 343 114563925 - Sfri_2760 - dTDP-glucose 4,6-dehydratase 2739 40.64 0 3317510..3318412 + 300 114563926 - Sfri_2761 - dTDP-4-dehydrorhamnose reductase 2740 42.11 0 3318558..3318728 + 56 114563927 - Sfri_2762 - hypothetical protein 2741 42.85 0 3318883..3320280 - 465 114563928 - Sfri_2763 - MgtE intracellular region 2742 35.80 -2 3320431..3320916 + 161 114563929 - Sfri_2764 - glutathione peroxidase 2743 42.03 0 3323277..3325058 - 593 114563930 - Sfri_2765 - peptidase M1, membrane alanine aminopeptidase 42.09 MEAN 3.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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