version 1.0
Shewanella frigidimarina NCIMB 400, complete genome - 1..4845257 4029 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1337 43.00 0 1602228..1603148 + 306 114562525 - Sfri_1347 - hypothetical protein 1338 38.49 -1 1603644..1604594 + 316 114562526 - Sfri_1348 - hypothetical protein 1339 40.79 0 1605047..1606615 + 522 114562527 - Sfri_1349 - ABC transporter related 1340 36.87 -1 1606744..1607139 + 131 114562528 - Sfri_1350 - hypothetical protein 1341 41.64 0 1607166..1607972 + 268 114562529 - Sfri_1351 - alpha/beta hydrolase fold 1342 42.15 0 1608270..1610276 + 668 114562530 - Sfri_1352 - methyl-accepting chemotaxis sensory transducer 1343 39.78 0 1610738..1611280 - 180 114562531 - Sfri_1353 - hypothetical protein 1344 39.60 0 1611310..1611915 - 201 114562532 - Sfri_1354 - lysine exporter protein LysE/YggA 1345 39.44 0 1612094..1612912 - 272 114562533 - Sfri_1355 - hypothetical protein 1346 37.28 -1 1613007..1613513 - 168 114562534 - Sfri_1356 - amino acid-binding ACT domain-containing protein 1347 42.77 0 1613710..1615965 + 751 114562535 - Sfri_1357 - binding-protein-dependent transport systems inner membrane component 1348 44.40 0 1616024..1617685 + 553 114562536 - Sfri_1358 - phosphate ABC transporter, inner membrane subunit PstA 1349 42.74 0 1617712..1618530 + 272 114562537 - Sfri_1359 - phosphate ABC transporter, ATPase subunit 1350 42.39 0 1618588..1619283 + 231 114562538 - Sfri_1360 - transcriptional regulator PhoU 1351 42.27 0 1619423..1620004 + 193 114562539 - Sfri_1361 - hypothetical protein 1352 40.86 0 1620297..1620668 + 123 114562540 - Sfri_1362 - hypothetical protein 1353 40.79 0 1621144..1621371 - 75 114562541 - Sfri_1363 - hypothetical protein 1354 40.93 0 1621451..1622767 + 438 114562542 - Sfri_1364 - hypothetical protein 1355 47.71 +1 1623023..1624072 + 349 114562543 - Sfri_1365 - 3-oxoacyl-(acyl carrier protein) synthase III 1356 43.72 0 1624131..1625006 + 291 114562544 - Sfri_1366 - alpha/beta hydrolase fold 1357 44.31 0 1625129..1626823 + 564 114562545 - Sfri_1367 - peptide synthase 1358 46.29 +1 1626857..1627906 + 349 114562546 - Sfri_1368 - 3-beta hydroxysteroid dehydrogenase/isomerase 1359 46.24 +1 1628128..1629312 + 394 114562547 - Sfri_1369 - methionine gamma-lyase 1360 48.60 +2 1629729..1630121 - 130 114562548 - Sfri_1370 - hypothetical protein 1361 38.35 -1 1630121..1632211 - 696 114562549 - Sfri_1371 - diguanylate cyclase/phosphodiesterase 1362 40.96 0 1632239..1632841 - 200 114562550 - Sfri_1372 - hypothetical protein 1363 40.19 0 1634326..1635492 + 388 114562551 - Sfri_1373 - UDP-glucose 6-dehydrogenase 1364 38.07 -1 1635522..1636535 + 337 114562552 - Sfri_1374 - NAD-dependent epimerase/dehydratase 1365 30.72 -2 1636544..1637347 + 267 114562553 - Sfri_1375 - glycosyl transferase, WecB/TagA/CpsF family protein 1366 32.07 -2 1637500..1638606 + 368 114562554 - Sfri_1376 - glycosyl transferase, group 1 1367 38.39 -1 1638606..1639712 + 368 114562555 - Sfri_1377 - glycosyl transferase, group 1 1368 31.25 -2 1639702..1640952 + 416 114562556 - Sfri_1378 - O-antigen polymerase 1369 30.76 -2 1640999..1641892 + 297 114562557 - Sfri_1379 - glycosyl transferase family protein 1370 30.79 -2 1641894..1643309 + 471 114562558 - Sfri_1380 - polysaccharide biosynthesis protein 1371 36.05 -1 1644675..1646075 + 466 114562559 - Sfri_1382 - sugar transferase 1372 40.10 0 1646576..1647787 + 403 114562560 - Sfri_1383 - hypothetical protein 1373 41.15 0 1647795..1648331 + 178 114562561 - Sfri_1384 - polysaccharide export protein 1374 41.52 0 1648331..1650601 + 756 114562562 - Sfri_1385 - hypothetical protein 1375 44.04 0 1650598..1651335 + 245 114562563 - Sfri_1386 - phosphotransferase domain-containing protein 1376 41.06 0 1651335..1652033 + 232 114562564 - Sfri_1387 - hypothetical protein 1377 38.41 -1 1652033..1653391 + 452 114562565 - Sfri_1388 - O-antigen polymerase 1378 40.63 0 1653825..1654715 + 296 114562566 - Sfri_1389 - UTP-glucose-1-phosphate uridylyltransferase 1379 42.60 0 1655505..1657598 - 697 114562567 - Sfri_1390 - FAD dependent oxidoreductase 1380 44.23 0 1657707..1658945 + 412 114562568 - Sfri_1391 - beta-ketoacyl synthase 1381 41.78 0 1659372..1660508 + 378 114562569 - Sfri_1392 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1382 42.38 0 1660688..1661704 + 338 114562570 - Sfri_1393 - aspartate-semialdehyde dehydrogenase 1383 41.92 0 1661995..1666221 + 1408 114562571 - Sfri_1394 - ATPase 1384 43.26 0 1666350..1667135 + 261 114562572 - Sfri_1395 - tRNA pseudouridine synthase A 1385 44.60 0 1667253..1668530 + 425 114562573 - Sfri_1396 - FolC bifunctional protein 1386 40.19 0 1668602..1669228 + 208 114562574 - Sfri_1397 - sporulation domain-containing protein 1387 41.72 0 1669381..1669869 + 162 114562575 - Sfri_1398 - colicin V production protein 1388 42.64 0 1669904..1671418 + 504 114562576 - Sfri_1399 - amidophosphoribosyltransferase 1389 40.99 0 1671977..1672681 - 234 114562577 - Sfri_1400 - hypothetical protein 1390 44.29 0 1672852..1674813 + 653 114562578 - Sfri_1401 - DNA topoisomerase III 1391 40.24 0 1674982..1675575 + 197 114562579 - Sfri_1402 - peptide methionine sulfoxide reductase 1392 37.11 -1 1675908..1676066 + 52 114562580 - Sfri_1403 - hypothetical protein 1393 42.74 0 1676179..1677114 - 311 114562581 - Sfri_1404 - transcriptional regulator, LysR family protein 1394 43.37 0 1677237..1678262 + 341 114562582 - Sfri_1405 - alcohol dehydrogenase 1395 39.86 0 1678323..1678613 + 96 114562583 - Sfri_1406 - antibiotic biosynthesis monooxygenase 1396 41.70 0 1678752..1680221 + 489 114562584 - Sfri_1407 - ABC transporter related 1397 41.58 0 1680444..1680989 + 181 114562585 - Sfri_1408 - redoxin domain-containing protein 1398 40.03 0 1681272..1681928 + 218 114562586 - Sfri_1409 - nitroreductase 1399 42.49 0 1682047..1683411 - 454 114562587 - Sfri_1410 - alpha/beta hydrolase fold 1400 40.78 0 1683518..1684162 + 214 114562588 - Sfri_1411 - beta-lactamase domain-containing protein 1401 45.03 0 1684286..1685302 + 338 114562589 - Sfri_1412 - hypothetical protein 1402 41.71 0 1685316..1685924 + 202 114562590 - Sfri_1413 - hypothetical protein 1403 45.92 +1 1685927..1686379 + 150 114562591 - Sfri_1414 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 1404 45.41 +1 1686382..1688625 + 747 114562592 - Sfri_1415 - twin-arginine translocation pathway signal 1405 42.32 0 1688863..1690308 + 481 114562593 - Sfri_1416 - methyl-accepting chemotaxis sensory transducer 1406 40.55 0 1690660..1691241 + 193 114562594 - Sfri_1417 - hypothetical protein 1407 40.19 0 1691244..1693577 + 777 114562595 - Sfri_1418 - diguanylate cyclase/phosphodiesterase 1408 42.82 0 1693613..1694866 + 417 114562596 - Sfri_1419 - hypothetical protein 1409 40.77 0 1695133..1695939 - 268 114562597 - Sfri_1420 - exonuclease III 1410 41.33 0 1695939..1696238 - 99 114562598 - Sfri_1421 - YciI-like protein 1411 36.05 -1 1696274..1696825 - 183 114562599 - Sfri_1422 - intracellular septation protein A 1412 40.83 0 1696946..1697839 - 297 114562600 - Sfri_1423 - hypothetical protein 1413 45.77 +1 1697930..1698733 - 267 114562601 trpA Sfri_1424 - tryptophan synthase subunit alpha 1414 45.63 +1 1698726..1699937 - 403 114562602 - Sfri_1425 - tryptophan synthase subunit beta 1415 42.02 0 1699995..1701398 - 467 114562603 - Sfri_1426 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1416 47.41 +1 1701391..1702434 - 347 114562604 - Sfri_1427 - anthranilate phosphoribosyltransferase 1417 44.97 0 1702434..1703069 - 211 114562605 - Sfri_1428 - anthranilate synthase component II 1418 44.34 0 1703066..1704637 - 523 114562606 - Sfri_1429 - anthranilate synthase component I 1419 43.90 0 1705090..1705950 + 286 114562607 - Sfri_1430 - phosphotransferase domain-containing protein 1420 40.74 0 1705947..1706567 + 206 114562608 - Sfri_1431 - Sua5/YciO/YrdC/YwlC family protein 1421 42.33 0 1706607..1707395 + 262 114562609 - Sfri_1432 - chromosome segregation and condensation protein ScpA 1422 41.33 0 1707418..1708155 + 245 114562610 - Sfri_1433 - putative transcriptional regulator 1423 40.22 0 1708152..1709138 - 328 114562611 - Sfri_1434 - transcriptional regulator, LysR family protein 1424 43.61 0 1709270..1710349 + 359 114562612 - Sfri_1435 - RND family efflux transporter MFP subunit 1425 42.60 0 1710353..1713418 + 1021 114562613 - Sfri_1436 - acriflavin resistance protein 1426 46.62 +1 1713690..1714562 + 290 114562614 - Sfri_1437 - pseudouridine synthase, Rsu 1427 41.82 0 1714757..1715086 + 109 114562615 - Sfri_1438 - hypothetical protein 1428 38.04 -1 1715974..1716249 - 91 114562616 - Sfri_1439 - histone family protein DNA-binding protein 1429 42.33 0 1716541..1717962 + 473 114562617 - Sfri_1440 - peptidoglycan binding domain-containing protein 1430 41.30 0 1718214..1718765 + 183 114562618 - Sfri_1441 - twin-arginine translocation pathway signal 1431 40.28 0 1719245..1719532 + 95 114562619 - Sfri_1442 - ribosomal protein L25 1432 41.33 0 1719680..1723594 - 1304 114562620 - Sfri_1443 - hypothetical protein 1433 42.16 0 1723591..1725381 - 596 114562621 - Sfri_1444 - surface antigen (D15) 1434 44.83 0 1725570..1726604 + 344 114562622 - Sfri_1445 - peptidase T2, asparaginase 2 1435 42.45 0 1726776..1727192 + 138 114562623 - Sfri_1446 - signal transduction protein 1436 42.16 0 1727270..1731145 + 1291 114562624 - Sfri_1447 - ATP-dependent helicase HrpA 42.09 MEAN 3.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0