version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 43 52.92 0 48627..49106 + 159 30061615 folA S0047 - dihydrofolate reductase 44 55.99 +1 49184..50026 - 280 30061616 apaH S0048 - diadenosine tetraphosphatase 45 51.85 0 50033..50410 - 125 30061617 apaG S0049 - ApaG 46 53.41 0 50413..51234 - 273 30061618 ksgA S0050 - dimethyladenosine transferase 47 56.26 +1 51231..52220 - 329 30061619 pdxA S0051 - 4-hydroxythreonine-4-phosphate dehydrogenase 48 53.85 0 52220..53506 - 428 30061620 surA S0052 - peptidyl-prolyl cis-trans isomerase SurA 49 51.38 0 53559..55913 - 784 30061621 imp S0053 - organic solvent tolerance protein 50 52.94 0 56168..56983 + 271 30061622 djlA S0054 - DNA-J like membrane chaperone protein 51 54.24 0 57100..57759 - 219 30061623 yabO S0055 - 23S rRNA/tRNA pseudouridine synthase A 52 54.87 0 57771..60677 - 968 30061624 hepA S0056 - ATP-dependent helicase HepA 53 55.19 0 60842..63193 - 783 30061625 polB S0057 - DNA polymerase II 54 55.17 0 63268..63963 - 231 30061626 araD S0058 - L-ribulose-5-phosphate 4-epimerase 55 55.29 0 64163..65665 - 500 30061627 araA S0059 - L-arabinose isomerase 56 58.08 +1 65676..67376 - 566 30061628 araB S0060 - ribulokinase 57 52.67 0 67715..68593 + 292 30061629 araC S0061 - DNA-binding transcriptional regulator AraC 58 54.51 0 68679..69443 + 254 30061630 yabI S0062 - hypothetical protein 59 56.94 +1 69557..70255 - 232 30061631 thiQ S0063 - thiamine transporter ATP-binding subunit 60 58.54 +1 70239..71849 - 536 30061632 thiP S0064 - thiamine transporter membrane protein 61 52.74 0 71825..72808 - 327 30061633 tbpA S0065 - thiamine transporter substrate binding subunit 62 55.19 0 72972..74627 - 551 30061634 yabN S0066 - transcriptional regulator SgrR 63 48.09 0 74949..76127 + 392 30061635 yabM S0067 - putative transport protein 64 52.15 0 76176..76781 - 201 30061636 leuD S0068 - isopropylmalate isomerase small subunit 65 55.32 0 76792..78192 - 466 30061637 leuC S0069 - isopropylmalate isomerase large subunit 66 55.22 0 78195..79286 - 363 161486552 leuB S0070 - 3-isopropylmalate dehydrogenase 67 52.74 0 79286..80857 - 523 30061639 leuA S0071 - 2-isopropylmalate synthase 68 47.13 -1 80950..81036 - 28 30061640 leuL S0072 - leu operon leader peptide 69 45.71 -1 81695..82639 + 314 161486551 leuO S0073 - leucine transcriptional activator 70 52.81 0 82957..84681 + 574 161486550 ilvI S0074 - acetolactate synthase 3 catalytic subunit 71 50.20 0 84684..85175 + 163 30061643 ilvH S0075 - acetolactate synthase 3 regulatory subunit 72 47.13 -1 85188..85274 + 28 30061644 fruL S0076 - fruR leader peptide 73 54.93 0 85356..86360 + 334 30061645 fruR S0077 - DNA-binding transcriptional regulator FruR 74 52.54 0 86483..86758 + 91 30061646 - S0078 - IS1 orfA 75 52.58 0 86677..87180 + 167 30061647 - S0079 - IS1 orfB 76 52.07 0 87739..88197 + 152 30061648 yabB S0080 - cell division protein MraZ 77 55.20 0 88199..89140 + 313 30061649 mraW S0081 - S-adenosyl-methyltransferase MraW 78 50.55 0 89137..89502 + 121 30061650 ftsL S0082 - cell division protein FtsL 79 53.88 0 89518..91284 + 588 30061651 ftsI S0083 - penicillin-binding protein 3; peptidoglycan synthetase 80 56.79 +1 91271..92758 + 495 30061652 murE S0084 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 81 54.82 0 92755..94113 + 452 30061653 murF S0085 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 82 52.82 0 94107..95189 + 360 30061654 mraY S0086 - phospho-N-acetylmuramoyl-pentapeptide-transferase 83 55.35 0 95192..96508 + 438 30061655 murD S0087 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 84 52.53 0 96508..97752 + 414 30061656 ftsW S0088 - cell division protein FtsW 85 55.71 +1 97749..98816 + 355 30061657 murG S0089 - N-acetylglucosaminyl transferase 86 54.40 0 98870..100345 + 491 30061658 murC S0090 - UDP-N-acetylmuramate--L-alanine ligase 87 51.36 0 100338..101258 + 306 30061659 ddl S0091 - D-alanine--D-alanine ligase 88 53.31 0 101260..102090 + 276 30061660 ftsQ S0092 - cell division protein FtsQ 89 52.02 0 102087..103349 + 420 30061661 ftsA S0093 - cell division protein FtsA 90 53.91 0 103410..104561 + 383 30061662 ftsZ S0094 - cell division protein FtsZ 91 51.20 0 104662..105579 + 305 30061663 lpxC S0095 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 92 54.00 0 105810..106322 + 170 161486549 yacA S0096 - SecA regulator SecM 93 52.22 0 106384..109089 + 901 30061665 secA S0097 - preprotein translocase subunit SecA 94 49.23 0 109149..109538 + 129 30061666 mutT S0098 - nucleoside triphosphate pyrophosphohydrolase 95 54.81 0 109553..109687 - 44 30061667 - S0099 - hypothetical protein 96 52.02 0 109638..109835 - 65 30061668 yacG S0100 - zinc-binding protein 97 51.21 0 109845..110588 - 247 30061669 yacF S0101 - hypothetical protein 98 52.33 0 110588..111208 - 206 30061670 coaE S0102 - dephospho-CoA kinase 99 51.72 0 111433..112476 + 347 30061671 guaC S0103 - guanosine 5'-monophosphate oxidoreductase 100 51.85 0 112396..112503 - 35 30061672 - S0104 - hypothetical protein 101 52.54 0 112511..113713 - 400 30061673 hofC S0105 - type IV pilin biogenesis protein 102 53.06 0 114860..115300 - 146 30061674 ppdD S0107 - putative major pilin subunit 103 53.36 0 115503..116396 - 297 30061675 nadC S0108 - quinolinate phosphoribosyltransferase 104 53.80 0 116484..117035 + 183 30061676 ampD S0109 - N-acetyl-anhydromuranmyl-L-alanine amidase 105 52.16 0 117032..117886 + 284 30061677 ampE S0110 - regulatory protein AmpE 106 52.69 0 117929..119302 - 457 30061678 aroP S0111 - aromatic amino acid transporter 107 55.82 +1 119843..120607 + 254 30061679 pdhR S0112 - transcriptional regulator PdhR 108 53.23 0 120768..123431 + 887 30061680 aceE S0113 - pyruvate dehydrogenase subunit E1 109 54.55 0 123446..125326 + 626 30061681 aceF S0114 - dihydrolipoamide acetyltransferase 110 52.70 0 125651..127075 + 474 30061682 lpdA S0115 - dihydrolipoamide dehydrogenase 111 55.77 +1 129353..131950 + 865 30061683 acnB S0117 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 112 52.07 0 132125..132487 + 120 161486548 yacL S0118 - hypothetical protein 113 45.91 -1 132525..133319 - 264 30061685 speD S0119 - S-adenosylmethionine decarboxylase 114 50.98 0 133335..134201 - 288 30061686 speE S0120 - spermidine synthase 115 49.04 0 134307..134777 - 156 30061687 yacC S0121 - hypothetical protein 116 54.55 0 134820..136370 + 516 30061688 yacK S0122 - multicopper oxidase 117 55.71 +1 136417..138807 - 796 30061689 gcd S0123 - glucose dehydrogenase 118 50.28 0 139013..139549 + 178 161486547 hpt S0124 - hypoxanthine-guanine phosphoribosyltransferase 119 50.83 0 139590..140252 - 220 30061691 yadF S0125 - carbonic anhydrase 120 48.87 0 140361..141287 + 308 30061692 yadG S0126 - putative ATP-binding component of a transport system 121 50.97 0 141284..142054 + 256 30061693 yadH S0127 - hypothetical protein 122 48.75 0 142159..142599 + 146 30061694 yadI S0128 - putative PTS enzyme II B component 123 49.11 0 142663..143892 + 409 30061695 yadE S0129 - hypothetical protein 124 52.76 0 143896..144276 - 126 30061696 panD S0130 - aspartate alpha-decarboxylase 125 48.62 0 144550..145452 + 300 30061697 yadD S0131 - hypothetical protein 126 52.23 0 145526..146377 - 283 30061698 panC S0132 - pantoate--beta-alanine ligase 127 53.84 0 146389..147183 - 264 30061699 panB S0133 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 128 52.54 0 147677..147952 + 91 30061700 - S0134 - IS1 orfA 129 52.78 0 147871..148374 + 167 30061701 - S0136 - IS1 orfB 130 52.08 0 148522..149001 - 159 30061702 folK S0137 - 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 131 55.32 0 148998..150416 - 472 161486546 pcnB S0138 - poly(A) polymerase I 132 53.96 0 150455..151351 - 298 161486545 yadB S0139 - glutamyl-Q tRNA(Asp) synthetase 133 52.63 0 151418..151873 - 151 30061705 dksA S0140 - DnaK transcriptional regulator DksA 134 49.08 0 152051..152755 - 234 30061706 sfsA S0141 - sugar fermentation stimulation protein A 135 55.93 +1 152770..153309 - 179 30061707 yadP S0142 - hypothetical protein 136 56.89 +1 153329..155803 + 824 30061708 hrpB S0143 - ATP-dependent RNA helicase HrpB 137 54.99 0 155999..158533 + 844 30061709 mrcB S0144 - penicillin-binding protein 1b 138 51.29 0 158753..160996 + 747 30061710 fhuA S0145 - ferrichrome outer membrane transporter 139 56.14 +1 161047..161844 + 265 30061711 fhuC S0146 - iron-hydroxamate transporter ATP-binding subunit 140 54.21 0 161844..162734 + 296 30061712 fhuD S0147 - iron-hydroxamate transporter substrate-binding subunit 141 59.46 +1 162731..164713 + 660 30061713 fhuB S0148 - iron-hydroxamate transporter permease subunit 142 55.74 +1 164748..166028 - 426 30061714 hemL S0149 - glutamate-1-semialdehyde aminotransferase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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