version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 854 54.43 0 929285..929611 + 108 30062427 - S0948 - IS629 orfA 855 54.05 0 929611..930498 + 295 30062428 - S0949 - IS629 orfB 856 52.91 0 930482..930670 + 62 30062429 - S0950 - hypothetical protein 857 52.54 0 931204..931479 + 91 30062430 - S0952 - IS1 orfA 858 52.78 0 931398..931901 + 167 30062431 - S0953 - IS1 orfB 859 46.53 -1 933145..933447 + 100 30062432 - S0956 - IS600 orfA 860 52.24 0 933588..934301 + 237 30062433 - S0957 - IS600 orfB 861 52.78 0 934544..935047 - 167 30062434 - S0958 - IS1 orfB 862 52.38 0 935162..935875 - 237 30062435 - S0959 - IS600 orfB 863 46.20 -1 936016..936318 - 100 30062436 - S0960 - IS600 orfA 864 49.53 0 936727..937467 - 246 30062437 pflA S0961 - pyruvate formate lyase-activating enzyme 1 865 51.07 0 937659..939941 - 760 30062438 pflB S0962 - formate acetyltransferase 1 866 48.60 0 939996..940853 - 285 30062439 focA S0963 - formate transporter 867 51.05 0 941259..943019 - 586 30062440 ycaO S0964 - hypothetical protein 868 50.41 0 943974..945062 + 362 30062441 serC S0966 - phosphoserine aminotransferase 869 50.78 0 945133..946416 + 427 30062442 aroA S0967 - 3-phosphoshikimate 1-carboxyvinyltransferase 870 54.25 0 946560..947888 + 442 30062443 yi41 S0968 - IS4 orf 871 49.54 0 948024..948788 + 254 30062444 ycaL S0969 - putative heat shock protein 872 53.80 0 948961..949644 + 227 30062445 cmk S0970 - cytidylate kinase 873 51.08 0 949755..951428 + 557 30062446 rpsA S0971 - 30S ribosomal protein S1 874 49.12 0 951588..951872 + 94 30062447 ihfB S0972 - integration host factor subunit beta 875 50.77 0 954375..956123 + 582 30062448 msbA S0974 - lipid transporter ATP-binding/permease protein 876 54.91 0 956120..957106 + 328 30062449 lpxK S0975 - tetraacyldisaccharide 4'-kinase 877 52.23 0 957143..958375 + 410 30062450 ycaQ S0976 - hypothetical protein 878 47.54 -1 958427..958609 + 60 30062451 ycaR S0977 - hypothetical protein 879 52.48 0 958606..959352 + 248 30062452 kdsB S0978 - 3-deoxy-manno-octulosonate cytidylyltransferase 880 52.46 0 959506..960399 + 297 30062453 - S0979 - hypothetical protein 881 52.44 0 960376..961155 - 259 30062454 ycbC S0980 - hypothetical protein 882 51.40 0 961291..962076 + 261 30062455 smtA S0981 - putative metallothionein SmtA 883 52.83 0 962073..963395 + 440 30062456 mukF S0982 - condesin subunit F 884 52.95 0 963403..964080 + 225 30062457 mukE S0983 - condesin subunit E 885 55.44 0 964080..968540 + 1486 30062458 mukB S0984 - cell division protein MukB 886 54.18 0 968703..970031 + 442 30062459 - S0985 - IS4 orf 887 52.71 0 970239..972086 + 615 30062460 ycbB S0986 - hypothetical protein 888 50.09 0 972267..972815 + 182 30062461 ycbK S0987 - hypothetical protein 889 52.01 0 972842..973489 + 215 30062462 ycbL S0988 - hypothetical protein 890 51.81 0 973712..974902 - 396 30062463 aspC S0989 - aromatic amino acid aminotransferase 891 47.66 0 975087..976175 - 362 30062464 ompF S0990 - outer membrane protein F 892 52.82 0 976776..978176 - 466 30062465 asnC S0991 - asparaginyl-tRNA synthetase 893 51.29 0 978345..979547 - 400 30062466 pncB S0992 - nicotinate phosphoribosyltransferase 894 53.44 0 979813..982428 + 871 30062467 pepN S0993 - aminopeptidase N 895 55.08 0 982635..983402 - 255 30062468 ssuB S0994 - aliphatic sulfonates transport ATP-binding subunit 896 55.08 0 984027..984932 - 301 161486519 - S0996 - insertion element IS2 transposase InsD 897 53.01 0 984890..985255 - 121 161486518 - S0997 - insertion sequence 2 OrfA protein 898 56.98 +1 985538..986683 - 381 30062471 ycbN S0999 - alkanesulfonate monooxygenase 899 52.50 0 986680..987639 - 319 161486517 ycbO S1000 - alkanesulfonate transporter substrate-binding subunit 900 54.17 0 987632..988207 - 191 30062473 ycbP S1001 - NAD(P)H-dependent FMN reductase 901 52.87 0 988345..989040 + 231 30062474 - S1002 - IS1 orfB, A 902 52.98 0 989411..989914 - 167 30062475 - S1004 - IS1 orfB 903 52.90 0 989833..990108 - 91 30062476 - S1005 - IS1 orfA 904 47.83 0 990248..992848 + 866 30062477 ycbS S1006 - putative outer membrane protein 905 48.37 0 992839..993822 + 327 30062478 - S1007 - fimbrial protein 906 47.15 -1 993920..994462 + 180 30062479 - S1008 - putative fimbrial-like protein 907 47.34 -1 994422..994985 + 187 30062480 - S1009 - putative fimbrial-like protein 908 50.95 0 994951..995688 + 245 30062481 ycbF S1010 - hypotheical protein 909 46.79 -1 995800..996810 + 336 30062482 pyrD S1011 - dihydroorotate dehydrogenase 2 910 49.57 0 996948..997526 + 192 30062483 ycbW S1012 - hypothetical protein 911 50.45 0 997523..998632 - 369 30062484 - S1013 - hypothetical protein 912 53.96 0 998876..1000984 + 702 30062485 ycbY S1014 - 23S rRNA m(2)G2445 methyltransferase 913 52.15 0 1000996..1002903 + 635 30062486 uup S1015 - ABC transporter ATPase component 914 52.23 0 1003033..1004286 + 417 30062487 pqiA S1016 - paraquat-inducible protein A 915 50.03 0 1004291..1005931 + 546 30062488 pqiB S1017 - paraquat-inducible protein B 916 52.13 0 1005928..1006491 + 187 30062489 ymbA S1018 - hypothetical protein 917 54.76 0 1006747..1006914 + 55 30062490 rmf S1019 - ribosome modulation factor 918 52.22 0 1006984..1007502 - 172 30062491 fabA S1020 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 919 51.79 0 1007571..1009331 - 586 30062492 - S1021 - putative ATP-dependent protease 920 46.36 -1 1009516..1009968 + 150 30062493 ycbG S1022 - hypothetical protein 921 53.20 0 1010044..1011090 - 348 30062494 ompA S1023 - outer membrane protein A 922 47.65 0 1011446..1011955 - 169 30062495 sulA S1024 - SOS cell division inhibitor 923 47.18 -1 1012174..1012599 + 141 30062496 - S1025 - hypothetical protein 924 53.01 0 1012675..1013040 + 121 161486516 - S1026 - insertion sequence 2 OrfA protein 925 56.40 +1 1013019..1013651 + 210 30062498 - S1027 - IS2 orfB 926 51.99 0 1013611..1015776 - 721 30062499 - S1028 - hypothetical protein 927 48.10 0 1015786..1016232 - 148 30062500 yccF S1029 - hypothetical protein 928 52.94 0 1016355..1018409 + 684 30062501 helD S1030 - DNA helicase IV 929 52.51 0 1018441..1018899 - 152 161486515 mgsA S1031 - methylglyoxal synthase 930 50.68 0 1018995..1019657 - 220 30062503 - S1032 - hypothetical protein 931 53.63 0 1019776..1020243 + 155 30062504 - S1033 - hypothetical protein 932 53.93 0 1020288..1020656 - 122 30062505 yccV S1034 - hypothetical protein 933 51.81 0 1020663..1021766 - 367 30062506 - S1035 - putative oxidoreductase 934 51.97 0 1021948..1022226 + 92 30062507 - S1036 - hypothetical protein 935 46.97 -1 1022223..1022552 - 109 161486514 yccK S1037 - sulfurtransferase TusE 936 50.30 0 1022643..1023302 - 219 30062509 yccA S1038 - hypothetical protein 937 55.23 0 1024022..1025140 + 372 30062510 hyaA S1040 - hydrogenase-1 small subunit 938 56.13 +1 1025137..1026930 + 597 30062511 hyaB S1041 - hydrogenase 1 large subunit 939 51.55 0 1026949..1027656 + 235 30062512 hyaC S1042 - hydrogenase 1 b-type cytochrome subunit 940 59.01 +1 1027653..1028240 + 195 30062513 hyaD S1043 - hydrogenase 1 maturation protease 941 56.89 +1 1028237..1028635 + 132 30062514 hyaE S1044 - hydrogenase-1 operon protein HyaE 942 54.90 0 1028632..1029489 + 285 30062515 hyaF S1045 - hydrogenase-1 operon protein hyaF 943 53.92 0 1029623..1031167 + 514 30062516 appC S1046 - third cytochrome oxidase, subunit I 944 52.42 0 1031179..1032315 + 378 30062517 appB S1047 - third cytochrome oxidase, subunit II 945 53.66 0 1032499..1033797 + 432 30062518 appA S1048 - phosphoanhydride phosphorylase 946 51.90 0 1036098..1036544 - 148 161486513 etp S1051 - phosphotyrosine-protein phosphatase 947 50.96 0 1036532..1037671 - 379 30062520 yccZ S1052 - exopolysaccharide export protein 948 52.07 0 1037717..1039813 - 698 30062521 ymcA S1053 - hypothetical protein 949 51.94 0 1039813..1040559 - 248 30062522 ymcB S1054 - hypothetical protein 950 47.91 0 1040556..1041200 - 214 30062523 ymcC S1055 - putative regulator 951 55.86 +1 1041307..1041630 - 107 30062524 ymcD S1056 - hypothetical protein 952 47.89 0 1042054..1042266 - 70 30062525 cspH S1057 - cold shock-like protein 953 52.90 0 1042621..1042896 + 91 30062526 - S1058 - IS1 orfA 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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