version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 543 49.23 0 597585..597974 - 129 161486531 sdhC S0589 - succinate dehydrogenase cytochrome b556 large membrane subunit 544 49.92 0 598683..599966 + 427 30062117 gltA S0590 - type II citrate synthase 545 47.62 0 600357..600923 + 188 30062118 ybgD S0591 - putative fimbrial-like protein 546 49.39 0 600974..603433 + 819 30062119 ybgQ S0592 - putative outer membrane protein 547 49.45 0 603448..604179 + 243 30062120 ybgP S0593 - putative chaperone 548 55.59 0 605359..606450 + 363 30062121 abrB S0595 - putative transport protein 549 52.65 0 606447..607238 - 263 30062122 nei S0596 - endonuclease VIII 550 57.28 +1 607274..608008 - 244 30062123 ybgL S0597 - hypothetical protein 551 57.23 +1 608924..609580 - 218 30062124 ybgJ S0599 - putative carboxylase 552 53.36 0 609603..610346 - 247 30062125 ybgI S0600 - putative hydrolase-oxidase 553 52.36 0 610617..612098 + 493 30062126 ybgH S0601 - putative transport protein 554 53.28 0 612248..613666 - 472 30062127 phrB S0602 - deoxyribodipyrimidine photolyase 555 49.80 0 613663..614172 - 169 30062128 ybgA S0603 - hypothetical protein 556 53.47 0 614301..614588 + 95 30062129 - S0604 - hypothetical protein 557 57.25 +1 615026..618412 - 1128 30062130 rhsE S0605 - putative Rhs-family protein 558 52.78 0 619028..619531 - 167 30062131 - S0606 - IS1 orfB 559 52.98 0 619450..619734 - 94 30062132 - S0607 - IS1 orfA 560 51.69 0 620220..620426 - 68 30062133 ybfA S0608 - hypothetical protein 561 54.60 0 620828..622501 + 557 30062134 kdpA S0609 - potassium-transporting ATPase subunit A 562 54.62 0 624580..625152 + 190 30062135 kdpC S0611 - potassium-transporting ATPase subunit C 563 50.38 0 631391..632710 + 439 30062136 potE S0615 - putrescine transporter 564 55.27 0 632766..634406 - 546 30062137 pgm S0616 - phosphoglucomutase 565 50.00 0 634432..634977 - 181 30062138 seqA S0617 - replication initiation regulator SeqA 566 50.85 0 635162..635926 + 254 30062139 ybfF S0618 - hypothetical protein 567 53.44 0 635997..636359 + 120 30062140 ybfE S0619 - LexA regulated protein 568 48.59 0 636499..637029 + 176 30062141 fldA S0620 - flavodoxin FldA 569 48.10 0 637318..637764 + 148 30062142 fur S0621 - ferric uptake regulator 570 49.24 0 637848..638174 - 108 30062143 ybfN S0622 - hypothetical protein 571 51.39 0 638211..639617 - 468 30062144 ybfM S0623 - hypothetical protein 572 52.43 0 640196..641860 - 554 30062145 glnS S0624 - glutaminyl-tRNA synthetase 573 54.85 0 642063..644009 - 648 30062146 nagE S0625 - N-acetyl glucosamine specific PTS system components IIABC 574 48.69 0 644342..645142 + 266 30062147 nagB S0626 - glucosamine-6-phosphate deaminase 575 51.96 0 645202..646350 + 382 30062148 nagA S0627 - N-acetylglucosamine-6-phosphate deacetylase 576 52.91 0 646359..647579 + 406 30062149 nagC S0628 - transcriptional repressor of nag (N-acetylglucosamine) operon 577 51.59 0 648776..650440 + 554 30062150 asnB S0630 - asparagine synthetase B 578 56.04 +1 651676..652851 - 391 30062151 ubiF S0642 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 579 54.04 0 652997..654421 + 474 30062152 yleA S0643 - hypothetical protein 580 53.98 0 654535..655614 + 359 30062153 ybeZ S0644 - putative ATP-binding protein in pho regulon 581 51.50 0 655611..656078 + 155 30062154 ybeY S0645 - putative metalloprotease 582 51.65 0 656168..657046 + 292 30062155 ybeX S0646 - putative transport protein 583 55.69 +1 657071..658609 + 512 30062156 lnt S0647 - apolipoprotein N-acyltransferase 584 48.73 0 659005..659913 + 302 30062157 ybeJ S0648 - glutamate and aspartate transporter subunit 585 53.04 0 660083..660823 + 246 30062158 gltJ S0649 - glutamate/aspartate transport system permease 586 50.22 0 660823..661497 + 224 30062159 gltK S0650 - glutamate/aspartate transport system permease 587 52.34 0 661497..662222 + 241 30062160 gltL S0651 - ATP-binding protein of glutamate/aspartate transport system 588 51.18 0 662340..663275 + 311 30062161 rihA S0652 - ribonucleoside hydrolase 1 589 47.52 -1 665089..666540 - 483 30062162 ybeV S0654 - hypothetical protein 590 48.02 0 666537..667244 - 235 30062163 ybeU S0655 - putative tRNA ligase 591 42.16 -2 667346..667900 + 184 30062164 ybeT S0656 - hypothetical protein 592 48.53 0 667910..669337 - 475 30062165 ybeS S0657 - putative enzyme 593 45.20 -1 669334..670041 - 235 30062166 ybeR S0658 - hypothetical protein 594 46.54 -1 670199..671182 + 327 30062167 ybeQ S0659 - hypothetical protein 595 51.97 0 671252..671734 - 160 30062168 ybeL S0660 - hypothetical protein 596 53.39 0 671969..674551 + 860 30062169 leuS S0661 - leucyl-tRNA synthetase 597 52.58 0 674566..675147 + 193 30062170 rlpB S0662 - LPS-assembly lipoprotein RplB 598 52.52 0 675147..676178 + 343 30062171 holA S0663 - DNA polymerase III subunit delta 599 49.84 0 676180..676821 + 213 30062172 nadD S0664 - nicotinic acid mononucleotide adenylyltransferase 600 50.65 0 676845..677456 + 203 30062173 phpB S0665 - alpha-ribazole phosphatase 601 53.33 0 677824..678033 + 69 30062174 ybeB S0666 - hypothetical protein 602 58.33 +1 678037..678504 + 155 30062175 ybeA S0667 - SPOUT methyltransferase superfamily protein 603 52.73 0 678535..680436 + 633 30062176 mrdA S0668 - penicillin-binding protein 2 604 51.84 0 680439..681551 + 370 30062177 mrdB S0669 - cell wall shape-determining protein 605 57.48 +1 681562..682650 + 362 30062178 rlpA S0670 - rare lipoprotein A 606 49.26 0 682789..684000 + 403 30062179 dacA S0671 - D-alanyl-D-alanine carboxypeptidase fraction A 607 46.21 -1 684111..684374 + 87 30062180 ybeD S0672 - hypothetical protein 608 47.66 0 684475..685116 + 213 161486530 lipB S0673 - lipoyltransferase 609 46.94 -1 685528..686328 + 266 30062182 ybeF S0674 - putative DNA-binding transcriptional regulator 610 53.42 0 686537..687502 + 321 30062183 lipA S0675 - lipoyl synthase 611 50.00 0 687603..687806 - 67 30062184 tatE S0676 - twin arginine translocase protein E 612 54.08 0 687935..688498 - 187 30062185 ybeM S0677 - putative amidase 613 48.96 0 688816..689199 + 127 30062186 ccrB S0679 - camphor resistance protein CrcB 614 43.81 -1 689253..689462 - 69 30062187 cspE S0680 - cold shock protein CspE 615 46.88 -1 689637..690197 - 186 30062188 crcA S0681 - palmitoyl transferase for Lipid A 616 51.15 0 690786..692171 + 461 30062189 dcuC S0682 - C4-dicarboxylate transporter DcuC 617 44.31 -1 692891..693400 - 169 30062190 - S0684 - putative repressor protein 618 51.07 0 693963..695417 + 484 30062191 - S0685 - putative phage transposase 619 46.86 -1 695479..695781 + 100 30062192 - S0686 - IS600 orfA 620 52.24 0 695922..696635 + 237 30062193 - S0687 - IS600 orfB 621 49.19 0 696632..696877 - 81 30062194 - S0688 - hypothetical protein 622 53.29 0 696919..697860 - 313 30062195 - S0689 - putative bacteriophage protein 623 49.02 0 697872..697973 - 33 30062196 - S0690 - hypothetical protein 624 54.62 0 698005..698361 - 118 30062197 - S0691 - putative bacteriophage protein 625 53.73 0 698365..699585 - 406 30062198 - S0692 - putative bacteriophage protein 626 54.47 0 699589..700047 - 152 30062199 - S0693 - putative bacteriophage protein 627 53.99 0 700223..701689 - 488 30062200 - S0694 - putative bacteriophage protein 628 49.15 0 701689..701922 - 77 30062201 - S0695 - hypothetical protein 629 48.89 0 701910..702449 - 179 30062202 - S0696 - putative bacteriophage protein 630 55.41 0 702434..703339 - 301 161486529 - S0697 - insertion element IS2 transposase InsD 631 53.01 0 703297..703662 - 121 161486528 - S0698 - insertion sequence 2 OrfA protein 632 47.76 0 703738..704361 - 207 30062205 - S0699 - putative bacteriophage protein 633 51.11 0 704372..705136 - 254 30062206 - S0700 - putative bacteriophage protein 634 53.59 0 705206..705832 - 208 30062207 - S0701 - IS911 orfB 635 56.22 +1 705829..706029 - 66 30062208 - S0702 - IS911 orfB 636 44.88 -1 706072..706374 - 100 30062209 - S0703 - IS911 orfA 637 56.90 +1 706519..706692 + 57 30062210 - S0704 - hypothetical protein 638 44.88 -1 707502..707804 + 100 30062211 - S0705 - IS911 orfA 639 56.22 +1 707847..708047 + 66 30062212 - S0706 - IS911 orfB 640 50.94 0 708044..708202 + 52 30062213 - S0707 - IS911 orfB 641 51.47 0 708293..708667 + 124 30062214 - S0708 - IS911 orfB 642 44.21 -1 708696..709118 + 140 30062215 - S0709 - putative bacteriophage protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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