version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 519 52.87 0 569243..570184 + 313 30062092 ybgR S0560 - zinc transporter ZitB 520 48.33 0 570181..570900 - 239 30062093 pnuC S0561 - PnuC protein 521 50.19 0 570938..571981 - 347 30062094 nadA S0562 - quinolinate synthetase 522 49.37 0 572965..573756 - 263 30062095 ybgF S0568 - hypothetical protein 523 51.34 0 573766..574287 - 173 30062096 pal S0569 - peptidoglycan-associated outer membrane lipoprotein 524 53.13 0 574322..575614 - 430 30062097 tolB S0570 - translocation protein TolB 525 52.25 0 575747..576988 - 413 30062098 tolA S0571 - cell envelope integrity inner membrane protein TolA 526 51.75 0 577053..577481 - 142 30062099 tolR S0572 - colicin uptake protein TolR 527 50.07 0 577485..578177 - 230 30062100 tolQ S0573 - colicin uptake protein TolQ 528 49.63 0 578174..578578 - 134 30062101 ybgC S0574 - acyl-CoA thioester hydrolase YbgC 529 50.00 0 578728..579021 - 97 30062102 ybgE S0575 - hypothetical protein 530 53.77 0 579149..580288 - 379 30062103 cydB S0576 - cytochrome d terminal oxidase polypeptide subunit II 531 52.74 0 580304..581875 - 523 30062104 cydA S0577 - cytochrome d terminal oxidase, polypeptide subunit I 532 49.47 0 582720..585353 - 877 30062105 ybgG S0578 - alpha-mannosidase 533 54.53 0 585371..587347 - 658 30062106 hrsA S0579 - 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC 534 48.25 0 587457..588401 + 314 30062107 farR S0580 - DNA-binding transcriptional repressor MngR 535 52.87 0 588283..589152 - 289 30062108 sucD S0581 - succinyl-CoA synthetase subunit alpha 536 54.76 0 589152..590318 - 388 30062109 sucC S0582 - succinyl-CoA synthetase subunit beta 537 55.91 +1 590412..591629 - 405 30062110 sucB S0583 - dihydrolipoamide acetyltransferase 538 55.39 0 591644..594445 - 933 30062111 kgd S0584 - alpha-ketoglutarate decarboxylase 539 49.43 0 594427..594687 - 86 30062112 - S0585 - hypothetical protein 540 52.02 0 594746..595462 - 238 30062113 sdhB S0586 - succinate dehydrogenase iron-sulfur subunit 541 56.08 +1 595478..597244 - 588 30062114 sdhA S0587 - succinate dehydrogenase flavoprotein subunit 542 51.15 0 597244..597591 - 115 30062115 sdhD S0588 - succinate dehydrogenase cytochrome b556 small membrane subunit 543 49.23 0 597585..597974 - 129 161486531 sdhC S0589 - succinate dehydrogenase cytochrome b556 large membrane subunit 544 49.92 0 598683..599966 + 427 30062117 gltA S0590 - type II citrate synthase 545 47.62 0 600357..600923 + 188 30062118 ybgD S0591 - putative fimbrial-like protein 546 49.39 0 600974..603433 + 819 30062119 ybgQ S0592 - putative outer membrane protein 547 49.45 0 603448..604179 + 243 30062120 ybgP S0593 - putative chaperone 548 55.59 0 605359..606450 + 363 30062121 abrB S0595 - putative transport protein 549 52.65 0 606447..607238 - 263 30062122 nei S0596 - endonuclease VIII 550 57.28 +1 607274..608008 - 244 30062123 ybgL S0597 - hypothetical protein 551 57.23 +1 608924..609580 - 218 30062124 ybgJ S0599 - putative carboxylase 552 53.36 0 609603..610346 - 247 30062125 ybgI S0600 - putative hydrolase-oxidase 553 52.36 0 610617..612098 + 493 30062126 ybgH S0601 - putative transport protein 554 53.28 0 612248..613666 - 472 30062127 phrB S0602 - deoxyribodipyrimidine photolyase 555 49.80 0 613663..614172 - 169 30062128 ybgA S0603 - hypothetical protein 556 53.47 0 614301..614588 + 95 30062129 - S0604 - hypothetical protein 557 57.25 +1 615026..618412 - 1128 30062130 rhsE S0605 - putative Rhs-family protein 558 52.78 0 619028..619531 - 167 30062131 - S0606 - IS1 orfB 559 52.98 0 619450..619734 - 94 30062132 - S0607 - IS1 orfA 560 51.69 0 620220..620426 - 68 30062133 ybfA S0608 - hypothetical protein 561 54.60 0 620828..622501 + 557 30062134 kdpA S0609 - potassium-transporting ATPase subunit A 562 54.62 0 624580..625152 + 190 30062135 kdpC S0611 - potassium-transporting ATPase subunit C 563 50.38 0 631391..632710 + 439 30062136 potE S0615 - putrescine transporter 564 55.27 0 632766..634406 - 546 30062137 pgm S0616 - phosphoglucomutase 565 50.00 0 634432..634977 - 181 30062138 seqA S0617 - replication initiation regulator SeqA 566 50.85 0 635162..635926 + 254 30062139 ybfF S0618 - hypothetical protein 567 53.44 0 635997..636359 + 120 30062140 ybfE S0619 - LexA regulated protein 568 48.59 0 636499..637029 + 176 30062141 fldA S0620 - flavodoxin FldA 569 48.10 0 637318..637764 + 148 30062142 fur S0621 - ferric uptake regulator 570 49.24 0 637848..638174 - 108 30062143 ybfN S0622 - hypothetical protein 571 51.39 0 638211..639617 - 468 30062144 ybfM S0623 - hypothetical protein 572 52.43 0 640196..641860 - 554 30062145 glnS S0624 - glutaminyl-tRNA synthetase 573 54.85 0 642063..644009 - 648 30062146 nagE S0625 - N-acetyl glucosamine specific PTS system components IIABC 574 48.69 0 644342..645142 + 266 30062147 nagB S0626 - glucosamine-6-phosphate deaminase 575 51.96 0 645202..646350 + 382 30062148 nagA S0627 - N-acetylglucosamine-6-phosphate deacetylase 576 52.91 0 646359..647579 + 406 30062149 nagC S0628 - transcriptional repressor of nag (N-acetylglucosamine) operon 577 51.59 0 648776..650440 + 554 30062150 asnB S0630 - asparagine synthetase B 578 56.04 +1 651676..652851 - 391 30062151 ubiF S0642 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 579 54.04 0 652997..654421 + 474 30062152 yleA S0643 - hypothetical protein 580 53.98 0 654535..655614 + 359 30062153 ybeZ S0644 - putative ATP-binding protein in pho regulon 581 51.50 0 655611..656078 + 155 30062154 ybeY S0645 - putative metalloprotease 582 51.65 0 656168..657046 + 292 30062155 ybeX S0646 - putative transport protein 583 55.69 +1 657071..658609 + 512 30062156 lnt S0647 - apolipoprotein N-acyltransferase 584 48.73 0 659005..659913 + 302 30062157 ybeJ S0648 - glutamate and aspartate transporter subunit 585 53.04 0 660083..660823 + 246 30062158 gltJ S0649 - glutamate/aspartate transport system permease 586 50.22 0 660823..661497 + 224 30062159 gltK S0650 - glutamate/aspartate transport system permease 587 52.34 0 661497..662222 + 241 30062160 gltL S0651 - ATP-binding protein of glutamate/aspartate transport system 588 51.18 0 662340..663275 + 311 30062161 rihA S0652 - ribonucleoside hydrolase 1 589 47.52 -1 665089..666540 - 483 30062162 ybeV S0654 - hypothetical protein 590 48.02 0 666537..667244 - 235 30062163 ybeU S0655 - putative tRNA ligase 591 42.16 -2 667346..667900 + 184 30062164 ybeT S0656 - hypothetical protein 592 48.53 0 667910..669337 - 475 30062165 ybeS S0657 - putative enzyme 593 45.20 -1 669334..670041 - 235 30062166 ybeR S0658 - hypothetical protein 594 46.54 -1 670199..671182 + 327 30062167 ybeQ S0659 - hypothetical protein 595 51.97 0 671252..671734 - 160 30062168 ybeL S0660 - hypothetical protein 596 53.39 0 671969..674551 + 860 30062169 leuS S0661 - leucyl-tRNA synthetase 597 52.58 0 674566..675147 + 193 30062170 rlpB S0662 - LPS-assembly lipoprotein RplB 598 52.52 0 675147..676178 + 343 30062171 holA S0663 - DNA polymerase III subunit delta 599 49.84 0 676180..676821 + 213 30062172 nadD S0664 - nicotinic acid mononucleotide adenylyltransferase 600 50.65 0 676845..677456 + 203 30062173 phpB S0665 - alpha-ribazole phosphatase 601 53.33 0 677824..678033 + 69 30062174 ybeB S0666 - hypothetical protein 602 58.33 +1 678037..678504 + 155 30062175 ybeA S0667 - SPOUT methyltransferase superfamily protein 603 52.73 0 678535..680436 + 633 30062176 mrdA S0668 - penicillin-binding protein 2 604 51.84 0 680439..681551 + 370 30062177 mrdB S0669 - cell wall shape-determining protein 605 57.48 +1 681562..682650 + 362 30062178 rlpA S0670 - rare lipoprotein A 606 49.26 0 682789..684000 + 403 30062179 dacA S0671 - D-alanyl-D-alanine carboxypeptidase fraction A 607 46.21 -1 684111..684374 + 87 30062180 ybeD S0672 - hypothetical protein 608 47.66 0 684475..685116 + 213 161486530 lipB S0673 - lipoyltransferase 609 46.94 -1 685528..686328 + 266 30062182 ybeF S0674 - putative DNA-binding transcriptional regulator 610 53.42 0 686537..687502 + 321 30062183 lipA S0675 - lipoyl synthase 611 50.00 0 687603..687806 - 67 30062184 tatE S0676 - twin arginine translocase protein E 612 54.08 0 687935..688498 - 187 30062185 ybeM S0677 - putative amidase 613 48.96 0 688816..689199 + 127 30062186 ccrB S0679 - camphor resistance protein CrcB 614 43.81 -1 689253..689462 - 69 30062187 cspE S0680 - cold shock protein CspE 615 46.88 -1 689637..690197 - 186 30062188 crcA S0681 - palmitoyl transferase for Lipid A 616 51.15 0 690786..692171 + 461 30062189 dcuC S0682 - C4-dicarboxylate transporter DcuC 617 44.31 -1 692891..693400 - 169 30062190 - S0684 - putative repressor protein 618 51.07 0 693963..695417 + 484 30062191 - S0685 - putative phage transposase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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