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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3963 54.86 0 4493043..4494380 + 445 30065541 amiB S4592 - N-acetylmuramoyl-l-alanine amidase II 3964 56.49 +1 4494390..4496237 + 615 30065542 mutL S4593 - DNA mismatch repair protein 3965 53.42 0 4496230..4497180 + 316 30065543 miaA S4594 - tRNA delta(2)-isopentenylpyrophosphate transferase 3966 48.54 0 4497266..4497574 + 102 30065544 hfq S4595 - RNA-binding protein Hfq 3967 53.86 0 4497650..4498930 + 426 30065545 hflX S4596 - putative GTPase HflX 3968 56.19 +1 4499016..4500275 + 419 30065546 hflK S4597 - FtsH protease regulator HflK 3969 52.64 0 4500278..4501282 + 334 30065547 hflC S4598 - FtsH protease regulator HflC 3970 48.99 0 4501364..4501561 + 65 30065548 yjeT S4599 - hypothetical protein 3971 53.81 0 4501665..4502963 + 432 30065549 purA S4600 - adenylosuccinate synthetase 3972 48.83 0 4503168..4503593 + 141 30065550 yjeB S4601 - transcriptional repressor NsrR 3973 55.12 0 4503632..4506073 + 813 161486368 vacB S4602 - exoribonuclease R 3974 56.01 +1 4506253..4506984 + 243 30065552 yjfH S4603 - 23S rRNA (guanosine-2'-O-)-methyltransferase 3975 52.90 0 4507085..4507360 + 91 30065553 - S4604 - IS1 orfA 3976 52.58 0 4507279..4507782 + 167 30065554 - S4605 - IS1 orfB 3977 49.61 0 4508048..4508686 + 212 30065555 yjfM S4607 - hypothetical protein 3978 53.26 0 4508689..4509852 + 387 30065556 yjfC S4608 - putative synthetase/amidase 3979 52.78 0 4511235..4511738 - 167 30065557 - S4610 - IS1 orfB 3980 52.54 0 4511657..4511932 - 91 30065558 - S4611 - IS1 orfA 3981 51.16 0 4512455..4512757 - 100 30065559 yjfN S4613 - hypothetical protein 3982 48.79 0 4512879..4513208 - 109 161486367 yjfO S4614 - hypothetical protein 3983 53.47 0 4513390..4514139 + 249 30065561 yjfP S4615 - esterase 3984 50.79 0 4514136..4514891 - 251 30065562 yjfQ S4616 - transcriptional repressor UlaR 3985 51.73 0 4514999..4516069 - 356 30065563 yjfR S4617 - putative L-ascorbate 6-phosphate lactonase 3986 52.36 0 4516418..4517815 + 465 161486366 ulaA S4618 - ascorbate-specific PTS system enzyme IIC 3987 50.98 0 4517831..4518136 + 101 30065565 sgaB S4619 - L-ascorbate-specific enzyme IIB component of PTS 3988 55.27 0 4518146..4518610 + 154 30065566 ptxA S4620 - L-ascorbate-specific enzyme IIA component of PTS 3989 56.07 +1 4518624..4519274 + 216 30065567 ulaD S4621 - 3-keto-L-gulonate-6-phosphate decarboxylase 3990 57.31 +1 4519284..4520138 + 284 30065568 sgaU S4622 - L-xylulose 5-phosphate 3-epimerase 3991 55.31 0 4520138..4520824 + 228 30065569 sgaE S4623 - L-ribulose-5-phosphate 4-epimerase 3992 46.01 -1 4520953..4521228 - 91 30065570 yjfY S4624 - hypothetical protein 3993 52.78 0 4521555..4521950 + 131 30065571 rpsF S4625 - 30S ribosomal protein S6 3994 51.75 0 4521957..4522271 + 104 30065572 priB S4626 - primosomal replication protein N 3995 52.63 0 4522276..4522503 + 75 30065573 rpsR S4627 - 30S ribosomal protein S18 3996 49.78 0 4522545..4522994 + 149 30065574 rplI S4628 - 50S ribosomal protein L9 3997 49.10 0 4523692..4523970 + 92 30065575 - S4629 - ISEhe3 orfA 3998 53.26 0 4524027..4524608 + 193 30065576 - S4630 - ISEhe3 orfB 3999 52.24 0 4524649..4525362 - 237 30065577 - S4631 - IS600 orfB 4000 46.20 -1 4525503..4525805 - 100 30065578 - S4632 - IS600 orfA 4001 44.24 -1 4525870..4526190 + 106 30065579 - S4633 - hypothetical protein 4002 40.58 -2 4526799..4528454 - 551 30065580 - S4635 - hypothetical protein 4003 52.90 0 4532719..4532994 + 91 30065581 - S4638 - IS1 orfA 4004 52.78 0 4532913..4533416 + 167 30065582 - S4639 - IS1 orfB 4005 55.44 0 4534262..4535116 - 284 30065583 yjiA S4640 - putative GTP-binding protein YjiA 4006 50.00 0 4535229..4535432 - 67 30065584 yjiX S4641 - hypothetical protein 4007 56.28 +1 4535482..4537647 - 721 30065585 yjiY S4642 - putative carbon starvation protein 4008 54.19 0 4538025..4538537 - 170 30065586 hpaC S4643 - component C of the 4HPA-hydroxylase 4009 46.09 -1 4540366..4541133 - 255 30065587 - S4646 - hypothetical protein 4010 46.02 -1 4541304..4542194 - 296 30065588 hpaA S4647 - putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein 4011 46.39 -1 4542204..4543559 - 451 30065589 hpaX S4648 - putative 4-hydroxyphenylacetate permease 4012 58.33 +1 4543581..4544384 - 267 30065590 hpaI S4649 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4013 57.59 +1 4544395..4545198 - 267 30065591 hpaH S4650 - 2-oxo-hept-3-ene-1, 7-dioate hydratase 4014 49.61 0 4545266..4545646 - 126 30065592 hpaF S4651 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4015 54.34 0 4545656..4546507 - 283 30065593 hpaD S4652 - homoprotocatechuate dyoxygenase 4016 58.55 +1 4546509..4547975 - 488 30065594 hpaE S4653 - 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 4017 55.97 +1 4547972..4549261 - 429 30065595 hpaG S4654 - 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase 4018 50.56 0 4549533..4549979 + 148 30065596 hpcR S4655 - regulator of the 4HPA-hydroxylase operon 4019 53.99 0 4550098..4551762 + 554 30065597 tsr S4656 - methyl-accepting chemotaxis protein I, serine sensor receptor 4020 51.76 0 4551811..4553172 - 453 30065598 yjiZ S4657 - putative transport protein 4021 46.22 -1 4553387..4554193 - 268 30065599 yjjM S4658 - hypothetical protein 4022 52.01 0 4555600..4557891 - 763 161486365 mdoB S4660 - phosphoglycerol transferase I 4023 49.80 0 4558145..4558642 - 165 30065601 yjjA S4661 - hypothetical protein 4024 50.95 0 4558688..4559425 - 245 30065602 dnaC S4662 - DNA replication protein DnaC 4025 56.67 +1 4559428..4559967 - 179 30065603 dnaT S4663 - primosomal protein I 4026 47.71 0 4560074..4560400 - 108 30065604 yjjB S4664 - hypothetical protein 4027 52.90 0 4561932..4562207 + 91 30065605 - S4666 - IS1 orfA 4028 52.98 0 4562126..4562629 + 167 30065606 - S4667 - IS1 orfB 4029 45.83 -1 4563227..4563850 + 207 161486364 bglJ S4669 - DNA-binding transcriptional activator BglJ 4030 52.85 0 4563888..4564676 - 262 30065608 fhuF S4670 - ferric iron reductase involved in ferric hydroximate transport 4031 54.65 0 4565691..4566722 - 343 30065609 rsmC S4674 - 16S ribosomal RNA m2G1207 methyltransferase 4032 57.73 +1 4566825..4567238 + 137 30065610 holD S4675 - DNA polymerase III subunit psi 4033 52.80 0 4567207..4567653 + 148 30065611 rimI S4676 - ribosomal-protein-alanine N-acetyltransferase 4034 52.65 0 4567668..4568345 + 225 30065612 yjjG S4677 - nucleotidase 4035 53.58 0 4568436..4570025 + 529 30065613 prfC S4678 - peptide chain release factor 3 4036 50.99 0 4570418..4571023 + 201 30065614 osmY S4679 - periplasmic protein 4037 54.19 0 4571423..4572496 + 357 30065615 yjjU S4680 - hypothetical protein 4038 55.56 0 4572637..4573275 + 212 30065616 yjjV S4681 - hypothetical protein 4039 54.51 0 4573489..4574352 - 287 30065617 yjjW S4682 - putative activating enzyme 4040 53.24 0 4574324..4575865 - 513 30065618 yjjI S4683 - hypothetical protein 4041 55.13 0 4576123..4576902 + 259 30065619 deoC S4684 - deoxyribose-phosphate aldolase 4042 55.40 0 4577029..4578351 + 440 30065620 deoA S4685 - thymidine phosphorylase 4043 54.00 0 4578404..4579627 + 407 30065621 deoB S4686 - phosphopentomutase 4044 52.92 0 4579684..4580403 + 239 30065622 deoD S4687 - purine nucleoside phosphorylase 4045 41.67 -2 4580564..4580827 - 87 30065623 - S4688 - hypothetical protein 4046 55.35 0 4581902..4582546 - 214 30065624 smp S4690 - hypothetical protein 4047 56.86 +1 4582652..4583620 + 322 30065625 serB S4691 - phosphoserine phosphatase 4048 57.63 +1 4583669..4585051 + 460 30065626 sms S4692 - DNA repair protein RadA 4049 51.42 0 4585072..4586304 + 410 161486363 nadR S4693 - nicotinamide-nucleotide adenylyltransferase 4050 55.34 0 4586612..4588279 - 555 30065628 yjjK S4694 - putative ABC transporter ATP-binding protein 4051 54.64 0 4588490..4590427 + 645 161486362 slt S4695 - lytic murein transglycosylase 4052 53.21 0 4590517..4590843 + 108 30065630 trpR S4696 - Trp operon repressor 4053 56.02 +1 4591500..4592147 + 215 30065631 gpmB S4698 - phosphoglycerate mutase 4054 53.10 0 4592144..4593013 - 289 30065632 rob S4699 - right origin-binding protein 4055 49.37 0 4593224..4593697 + 157 30065633 creA S4700 - hypothetical protein 4056 54.93 0 4593710..4594399 + 229 30065634 creB S4701 - DNA-binding response regulator CreB 4057 53.89 0 4594399..4595823 + 474 30065635 creC S4702 - sensory histidine kinase CreC 4058 49.59 0 4595881..4597233 + 450 30065636 creD S4703 - hypothetical protein 4059 51.05 0 4597292..4598008 - 238 30065637 arcA S4704 - two-component response regulator 4060 42.55 -2 4598104..4598244 + 46 30065638 yjjY S4705 - hypothetical protein 4061 50.22 0 4598644..4599330 + 228 30065639 lasT S4706 - putative RNA methyltransferase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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