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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3638 52.98 0 4149095..4149598 + 167 30065216 - S4236 - IS1 orfB 3639 54.32 0 4150511..4151863 - 450 30065217 gor S4237 - glutathione reductase 3640 55.28 0 4151935..4152777 - 280 30065218 yhiR S4238 - hypothetical protein 3641 55.21 0 4152980..4155022 + 680 30065219 prlC S4239 - oligopeptidase A 3642 59.10 +1 4155030..4155782 + 250 30065220 yhiQ S4240 - putative methyltransferase 3643 48.51 0 4157618..4158052 - 144 30065221 uspA S4242 - universal stress protein 3644 47.02 -1 4158446..4158781 + 111 30065222 yhiO S4243 - universal stress protein UspB 3645 54.00 0 4158852..4160351 - 499 30065223 pitA S4244 - low-affinity phosphate transport protein 3646 54.00 0 4160583..4161782 + 399 30065224 yhiN S4245 - hypothetical protein 3647 52.54 0 4162311..4162586 + 91 30065225 - S4246 - IS1 orfA 3648 52.98 0 4162505..4163008 + 167 30065226 - S4247 - IS1 orfB 3649 46.33 -1 4163019..4163318 - 99 30065227 - S4248 - IS600 orfA 3650 50.29 0 4163583..4164608 + 341 30065228 - S4249 - hypothetical protein 3651 42.07 -2 4166011..4166571 + 186 30065229 - S4250 - chaperone 3652 43.43 -2 4166615..4167694 + 359 30065230 - S4254 - fimbrial protein remnant 3653 55.30 0 4167949..4168854 - 301 161486387 - S4252 - insertion element IS2 transposase InsD 3654 53.01 0 4168812..4169177 - 121 161486386 - S4253 - insertion sequence 2 OrfA protein 3655 46.59 -1 4170556..4171068 + 170 30065233 - S4255 - hypothetical protein 3656 37.27 -2 4171175..4171936 - 253 30065234 - S4836 - hypothetical protein 3657 35.56 -2 4172182..4172946 + 254 30065235 - S4837 - hypothetical protein 3658 35.66 -2 4172900..4173415 + 171 30065236 - S4838 - hypothetical protein 3659 37.52 -2 4176769..4178391 + 540 30065237 yhiJ S4259 - hypothetical protein 3660 59.18 +1 4178757..4179824 + 355 30065238 yhiI S4260 - hypothetical protein 3661 56.65 +1 4179821..4182556 + 911 30065239 yhiH S4261 - putative ATP-binding component of a transport system 3662 54.67 0 4182556..4183680 + 374 30065240 yhhJ S4262 - putative transporter 3663 43.33 -2 4184011..4184370 + 119 30065241 - S4263 - hypothetical protein 3664 55.72 +1 4184490..4184891 - 133 30065242 yhhG S4264 - nickel responsive regulator 3665 55.76 +1 4184897..4185703 - 268 30065243 nikE S4265 - nickel transporter ATP-binding protein 3666 58.95 +1 4185700..4186464 - 254 30065244 nikD S4266 - nickel transporter ATP-binding protein 3667 60.31 +2 4186464..4187297 - 277 30065245 nikC S4267 - nickel transporter permease NikC 3668 57.99 +1 4187294..4188238 - 314 30065246 nikB S4268 - nickel transporter permease NikB 3669 53.40 0 4188238..4189812 - 524 30065247 nikA S4269 - periplasmic binding protein for nickel 3670 56.63 +1 4189923..4190510 - 195 30065248 yhhU S4270 - holo-(acyl carrier protein) synthase 2 3671 51.24 0 4190565..4191614 - 349 30065249 yhhT S4271 - hypothetical protein 3672 56.65 +1 4191748..4192965 + 405 161486385 yhhS S4272 - hypothetical protein 3673 51.43 0 4192969..4193526 - 185 161486384 - S4273 - hypothetical protein 3674 50.45 0 4193599..4194264 - 221 30065252 yhhQ S4274 - hypothetical protein 3675 54.07 0 4194485..4194730 + 81 30065253 yhhP S4275 - cell developmental protein SirA 3676 57.94 +1 4194832..4197030 - 732 30065254 zntA S4276 - zinc/cadmium/mercury/lead-transporting ATPase 3677 56.46 +1 4197104..4197730 - 208 30065255 yhhN S4277 - putative enzyme 3678 50.83 0 4197871..4198230 + 119 30065256 yhhM S4278 - putative receptor 3679 44.81 -1 4198233..4198502 - 89 30065257 yhhL S4279 - hypothetical protein 3680 53.77 0 4198492..4199088 - 198 30065258 yhhF S4280 - 16S rRNA m(2)G966-methyltransferase 3681 53.17 0 4199238..4200734 + 498 30065259 ftsY S4281 - cell division protein FtsY 3682 55.46 0 4200737..4201405 + 222 30065260 ftsE S4282 - cell division protein FtsE 3683 53.64 0 4201398..4202456 + 352 30065261 ftsX S4283 - cell division protein FtsX 3684 54.04 0 4202701..4203555 + 284 30065262 rpoH S4284 - RNA polymerase factor sigma-32 3685 53.75 0 4203769..4204929 + 386 30065263 livJ S4285 - high-affinity amino acid transport protein, periplasmic binding protein 3686 55.99 +1 4205128..4205511 - 127 30065264 yhhK S4286 - hypothetical protein 3687 54.41 0 4205935..4207044 + 369 30065265 livK S4287 - high-affinity leucine-specific transport protein, periplasmic binding protein 3688 55.77 +1 4207092..4208018 + 308 30065266 livH S4288 - branched-chain amino acid transporter permease subunit LivH 3689 56.26 +1 4208015..4209292 + 425 30065267 livM S4289 - leucine/isoleucine/valine transporter permease subunit 3690 53.91 0 4209289..4210056 + 255 30065268 livG S4290 - leucine/isoleucine/valine transporter ATP-binding subunit 3691 57.42 +1 4210058..4210771 + 237 30065269 livF S4291 - leucine/isoleucine/valine transporter ATP-binding subunit 3692 53.45 0 4211168..4212484 + 438 30065270 ugpB S4292 - glycerol-3-phosphate transporter periplasmic binding protein 3693 55.52 0 4212582..4213469 + 295 30065271 ugpA S4293 - glycerol-3-phosphate transporter permease 3694 54.26 0 4213466..4214311 + 281 30065272 ugpE S4294 - glycerol-3-phosphate transporter membrane protein 3695 56.18 +1 4215300..4216043 + 247 30065273 ugpQ S4296 - cytoplasmic glycerophosphodiester phosphodiesterase 3696 51.47 0 4216030..4216470 - 146 30065274 yhhA S4297 - hypothetical protein 3697 55.08 0 4216590..4218332 + 580 30065275 ggt S4298 - gamma-glutamyltranspeptidase periplasmic precursor 3698 51.94 0 4218391..4218879 - 162 30065276 yhhY S4299 - putative acetyltransferase YhhY 3699 50.87 0 4219212..4220249 + 345 30065277 yhhX S4300 - putative dehydrogenase 3700 52.30 0 4220372..4221067 + 231 30065278 yhhW S4301 - hypothetical protein 3701 54.95 0 4221348..4222286 + 312 30065279 gntR S4302 - regulator of gluconate (gnt) operon 3702 50.57 0 4222425..4222952 + 175 161486383 gntK S4303 - gluconate kinase 1 3703 55.87 +1 4223019..4224296 + 425 30065281 gntU S4304 - low affinity gluconate transporter 3704 50.17 0 4224353..4224946 - 197 30065282 yhgN S4306 - dITP- and XTP- hydrolyzing protein 3705 54.08 0 4225138..4226241 + 367 30065283 asd S4307 - aspartate-semialdehyde dehydrogenase 3706 53.04 0 4226514..4228700 + 728 30065284 glgB S4308 - glycogen branching enzyme 3707 54.15 0 4228697..4230670 + 657 30065285 glgX S4309 - glycogen debranching enzyme 3708 52.31 0 4230688..4231983 + 431 30065286 glgC S4310 - glucose-1-phosphate adenylyltransferase 3709 54.74 0 4231983..4233416 + 477 30065287 glgA S4311 - glycogen synthase 3710 50.86 0 4233435..4235882 + 815 30065288 glgP S4312 - glycogen phosphorylase 3711 55.94 +1 4236000..4236866 + 288 30065289 - S4313 - IS4 orf 3712 50.88 0 4236872..4237327 + 151 30065290 - S4314 - IS4 orf 3713 55.65 +1 4237934..4239412 - 492 30065291 glpD S4316 - glycerol-3-phosphate dehydrogenase 3714 54.43 0 4239630..4239956 + 108 30065292 glpE S4317 - thiosulfate sulfurtransferase 3715 54.18 0 4240007..4240831 + 274 30065293 glpG S4318 - intramembrane serine protease GlpG 3716 54.94 0 4240848..4241606 + 252 30065294 glpR S4319 - DNA-binding transcriptional repressor GlpR 3717 55.35 0 4241588..4243186 - 532 30065295 rtcR S4320 - putative 2-component regulator 3718 51.34 0 4243367..4244593 + 408 30065296 rtcB S4321 - hypothetical protein 3719 55.94 +1 4245008..4245613 + 201 30065297 yhgJ S4323 - RNA 3'-terminal-phosphate cyclase 3720 51.92 0 4248973..4251366 + 797 30065298 malP S4325 - maltodextrin phosphorylase 3721 54.82 0 4251376..4253460 + 694 30065299 malQ S4326 - 4-alpha-glucanotransferase 3722 53.76 0 4253505..4254821 - 438 30065300 gntT S4327 - high-affinity transport permease for gluconate 3723 53.12 0 4255182..4255757 - 191 30065301 yhgI S4328 - putative DNA uptake protein 3724 55.70 +1 4255816..4256499 - 227 161486382 yhgH S4330 - gluconate periplasmic binding protein 3725 55.89 +1 4256537..4257325 + 262 30065303 bioH S4329 - carboxylesterase BioH 3726 55.30 0 4258051..4258956 - 301 161486381 - S4331 - insertion element IS2 transposase InsD 3727 53.01 0 4258914..4259279 - 121 161486380 - S4332 - insertion sequence 2 OrfA protein 3728 47.86 0 4259355..4260242 - 295 30065306 yhgA S4333 - hypothetical protein 3729 55.27 0 4260445..4260681 - 78 30065307 yhgG S4334 - hypothetical protein 3730 54.69 0 4260681..4263002 - 773 30065308 feoB S4335 - ferrous iron transport protein B 3731 49.12 0 4263019..4263246 - 75 30065309 feoA S4336 - ferrous iron transport protein A 3732 56.77 +1 4263684..4265906 - 740 30065310 yhgF S4337 - hypothetical protein 3733 49.69 0 4266102..4266578 - 158 161486379 greB S4338 - transcription elongation factor GreB 3734 54.72 0 4266806..4267525 + 239 30065312 ompR S4339 - osmolarity response regulator 3735 56.98 +1 4267522..4268874 + 450 30065313 envZ S4340 - osmolarity sensor protein 3736 53.91 0 4268950..4270572 - 540 30065314 pckA S4341 - phosphoenolpyruvate carboxykinase 3737 50.06 0 4270951..4272702 + 583 30065315 yhgE S4342 - putative transport protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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