version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3574 46.69 -1 4066673..4067668 - 331 30065152 yiaH S4164 - hypothetical protein 3575 55.81 +1 4068237..4069148 + 303 30065153 glyQ S4165 - glycyl-tRNA synthetase subunit alpha 3576 55.70 +1 4069158..4071227 + 689 30065154 glyS S4166 - glycyl-tRNA synthetase subunit beta 3577 52.58 0 4071285..4071788 - 167 30065155 - S4167 - IS1 orfB 3578 52.54 0 4071707..4071982 - 91 30065156 - S4168 - IS1 orfA 3579 50.84 0 4072203..4072499 + 98 30065157 - S4169 - hypothetical protein 3580 42.11 -2 4076000..4076728 - 242 30065158 yhiW S4171 - putative ARAC-type regulatory protein 3581 41.21 -2 4077096..4077920 - 274 30065159 yhiX S4172 - DNA-binding transcriptional regulator GadX 3582 53.89 0 4078290..4079690 - 466 30065160 gadA S4173 - glutamate decarboxylase isozyme 3583 48.50 0 4079901..4081298 - 465 30065161 yhjA S4174 - putative cytochrome C peroxidase 3584 52.98 0 4081357..4081860 - 167 30065162 - S4175 - IS1 orfB 3585 52.90 0 4081779..4082054 - 91 30065163 - S4177 - IS1 orfA 3586 42.96 -2 4082600..4083451 + 283 30065164 - S4178 - IS150 putative transposase 3587 48.36 0 4083892..4084104 - 70 30065165 cspA S4179 - major cold shock protein 3588 40.48 -2 4084550..4084675 - 41 30065166 yiaG S4180 - hypothetical protein 3589 49.70 0 4084989..4085819 + 276 30065167 yiaF S4181 - hypothetical protein 3590 52.00 0 4085869..4086843 - 324 30065168 yiaE S4182 - 2-hydroxyacid dehydrogenase 3591 59.33 +1 4086947..4087573 - 208 30065169 yiaD S4183 - putative outer membrane lipoprotein 3592 54.56 0 4087814..4090093 + 759 30065170 bisC S4184 - biotin sulfoxide reductase 3593 52.15 0 4090062..4090502 - 146 30065171 yiaC S4185 - hypothetical protein 3594 49.82 0 4090499..4091062 - 187 30065172 tag S4186 - 3-methyl-adenine DNA glycosylase I 3595 49.93 0 4091220..4091918 + 232 30065173 yhjY S4187 - putative lipase 3596 51.53 0 4092147..4093355 + 402 30065174 yhjX S4188 - putative resistance protein 3597 50.30 0 4093679..4095370 + 563 161486388 yhjW S4189 - phosphoethanolamine transferase 3598 51.87 0 4096282..4097889 + 535 30065176 dppA S4191 - dipeptide transport protein 3599 56.18 +1 4098197..4099216 + 339 30065177 dppB S4192 - dipeptide transporter permease DppB 3600 58.91 +1 4099226..4100128 + 300 30065178 dppC S4193 - dipeptide transporter 3601 55.89 +1 4100139..4101122 + 327 30065179 dppD S4194 - dipeptide transporter ATP-binding subunit 3602 55.82 +1 4101119..4102123 + 334 30065180 dppF S4195 - dipeptide transporter ATP-binding subunit 3603 44.97 -1 4102153..4103424 - 423 30065181 yhjV S4196 - putative transporter protein 3604 52.26 0 4104577..4106256 - 559 30065182 yhjU S4197 - hypothetical protein 3605 47.92 0 4106253..4106444 - 63 30065183 yhjT S4198 - hypothetical protein 3606 48.92 0 4106441..4108012 - 523 30065184 yhjS S4199 - putative protease 3607 46.03 -1 4108285..4108473 + 62 30065185 yhjR S4200 - hypothetical protein 3608 54.05 0 4108485..4109237 + 250 30065186 yhjQ S4201 - cell division protein 3609 54.76 0 4111892..4114201 + 769 30065187 yhjN S4203 - cellulose synthase regulator protein 3610 54.11 0 4114208..4115314 + 368 30065188 yhjM S4204 - endo-1,4-D-glucanase 3611 52.41 0 4117746..4119695 + 649 30065189 yhjK S4206 - putative phosphodiesterase 3612 51.67 0 4119885..4121171 + 428 30065190 dctA S4207 - C4-dicarboxylate transporter DctA 3613 54.04 0 4121392..4122888 + 498 30065191 yhjJ S4208 - hypothetical protein 3614 54.48 0 4122984..4124132 - 382 30065192 kdgK S4209 - ketodeoxygluconokinase 3615 52.86 0 4124145..4124912 + 255 30065193 yhjH S4210 - EAL domain-containing protein 3616 52.98 0 4124982..4127042 + 686 30065194 yhjG S4211 - hypothetical protein 3617 56.01 +1 4127224..4128546 - 440 30065195 yhjE S4212 - putative transport protein 3618 52.66 0 4128957..4129970 - 337 30065196 yhjD S4213 - hypothetical protein 3619 52.16 0 4130019..4130990 - 323 30065197 yhjC S4214 - putative transcriptional regulator LYSR-type 3620 47.93 0 4131438..4132040 + 200 30065198 yhjB S4215 - putative regulator 3621 54.25 0 4132056..4133384 - 442 30065199 - S4216 - IS4 orf 3622 53.88 0 4133529..4135178 - 549 30065200 treF S4217 - trehalase 3623 52.90 0 4135449..4135724 + 91 30065201 - S4218 - IS1 orfA 3624 52.78 0 4135643..4136146 + 167 30065202 - S4219 - IS1 orfB 3625 32.95 -2 4137898..4138425 - 175 30065203 yhiE S4221 - hypothetical protein 3626 46.77 -1 4139224..4139796 - 190 30065204 hdeD S4222 - acid-resistance membrane protein 3627 42.64 -2 4140051..4140383 + 110 30065205 hdeA S4223 - acid-resistance protein 3628 39.53 -2 4140487..4140825 + 112 30065206 hdeB S4224 - acid-resistance protein 3629 38.98 -2 4141577..4142107 - 176 30065207 yhiF S4226 - hypothetical protein 3630 44.67 -1 4142263..4142862 - 199 30065208 slp S4227 - outer membrane protein induced after carbon starvation 3631 45.87 -1 4144880..4145836 - 318 30065209 - S4229 - hypothetical protein 3632 52.78 0 4145867..4146370 - 167 30065210 - S4230 - IS1 orfB 3633 52.90 0 4146289..4146564 - 91 30065211 - S4231 - IS1 orfA 3634 49.86 0 4146620..4146964 + 114 30065212 arsR S4232 - DNA-binding transcriptional repressor ArsR 3635 54.50 0 4147018..4148307 + 429 30065213 arsB S4233 - arsenical pump membrane protein 3636 52.11 0 4148320..4148745 + 141 30065214 arsC S4234 - arsenate reductase 3637 52.90 0 4148901..4149176 + 91 30065215 - S4235 - IS1 orfB 3638 52.98 0 4149095..4149598 + 167 30065216 - S4236 - IS1 orfB 3639 54.32 0 4150511..4151863 - 450 30065217 gor S4237 - glutathione reductase 3640 55.28 0 4151935..4152777 - 280 30065218 yhiR S4238 - hypothetical protein 3641 55.21 0 4152980..4155022 + 680 30065219 prlC S4239 - oligopeptidase A 3642 59.10 +1 4155030..4155782 + 250 30065220 yhiQ S4240 - putative methyltransferase 3643 48.51 0 4157618..4158052 - 144 30065221 uspA S4242 - universal stress protein 3644 47.02 -1 4158446..4158781 + 111 30065222 yhiO S4243 - universal stress protein UspB 3645 54.00 0 4158852..4160351 - 499 30065223 pitA S4244 - low-affinity phosphate transport protein 3646 54.00 0 4160583..4161782 + 399 30065224 yhiN S4245 - hypothetical protein 3647 52.54 0 4162311..4162586 + 91 30065225 - S4246 - IS1 orfA 3648 52.98 0 4162505..4163008 + 167 30065226 - S4247 - IS1 orfB 3649 46.33 -1 4163019..4163318 - 99 30065227 - S4248 - IS600 orfA 3650 50.29 0 4163583..4164608 + 341 30065228 - S4249 - hypothetical protein 3651 42.07 -2 4166011..4166571 + 186 30065229 - S4250 - chaperone 3652 43.43 -2 4166615..4167694 + 359 30065230 - S4254 - fimbrial protein remnant 3653 55.30 0 4167949..4168854 - 301 161486387 - S4252 - insertion element IS2 transposase InsD 3654 53.01 0 4168812..4169177 - 121 161486386 - S4253 - insertion sequence 2 OrfA protein 3655 46.59 -1 4170556..4171068 + 170 30065233 - S4255 - hypothetical protein 3656 37.27 -2 4171175..4171936 - 253 30065234 - S4836 - hypothetical protein 3657 35.56 -2 4172182..4172946 + 254 30065235 - S4837 - hypothetical protein 3658 35.66 -2 4172900..4173415 + 171 30065236 - S4838 - hypothetical protein 3659 37.52 -2 4176769..4178391 + 540 30065237 yhiJ S4259 - hypothetical protein 3660 59.18 +1 4178757..4179824 + 355 30065238 yhiI S4260 - hypothetical protein 3661 56.65 +1 4179821..4182556 + 911 30065239 yhiH S4261 - putative ATP-binding component of a transport system 3662 54.67 0 4182556..4183680 + 374 30065240 yhhJ S4262 - putative transporter 3663 43.33 -2 4184011..4184370 + 119 30065241 - S4263 - hypothetical protein 3664 55.72 +1 4184490..4184891 - 133 30065242 yhhG S4264 - nickel responsive regulator 3665 55.76 +1 4184897..4185703 - 268 30065243 nikE S4265 - nickel transporter ATP-binding protein 3666 58.95 +1 4185700..4186464 - 254 30065244 nikD S4266 - nickel transporter ATP-binding protein 3667 60.31 +2 4186464..4187297 - 277 30065245 nikC S4267 - nickel transporter permease NikC 3668 57.99 +1 4187294..4188238 - 314 30065246 nikB S4268 - nickel transporter permease NikB 3669 53.40 0 4188238..4189812 - 524 30065247 nikA S4269 - periplasmic binding protein for nickel 3670 56.63 +1 4189923..4190510 - 195 30065248 yhhU S4270 - holo-(acyl carrier protein) synthase 2 3671 51.24 0 4190565..4191614 - 349 30065249 yhhT S4271 - hypothetical protein 3672 56.65 +1 4191748..4192965 + 405 161486385 yhhS S4272 - hypothetical protein 3673 51.43 0 4192969..4193526 - 185 161486384 - S4273 - hypothetical protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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