version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3545 52.58 0 4031675..4032178 + 167 30065123 - S4131 - IS1 orfB 3546 50.96 0 4032297..4032659 - 120 30065124 yibL S4132 - hypothetical protein 3547 51.19 0 4033164..4033751 - 195 30065125 mtlR S4133 - mannitol repressor protein 3548 53.00 0 4033751..4034899 - 382 30065126 mtlD S4134 - mannitol-1-phosphate 5-dehydrogenase 3549 53.40 0 4034994..4036907 - 637 30065127 mtlA S4135 - PTS system, mannitol-specific enzyme IIABC components 3550 51.24 0 4037444..4037806 + 120 30065128 yibI S4136 - hypothetical protein 3551 52.21 0 4037809..4038894 + 361 30065129 yibH S4137 - hypothetical protein 3552 52.87 0 4038965..4039573 + 202 30065130 yibF S4138 - glutathione S-transferase 3553 56.39 +1 4039671..4041062 + 463 30065131 selA S4139 - selenocysteine synthase 3554 56.21 +1 4041059..4042903 + 614 30065132 selB S4140 - selenocysteinyl-tRNA-specific translation factor 3555 50.35 0 4043093..4044244 + 383 30065133 yiaY S4141 - putative alcohol dehydrogenase 3556 54.57 0 4044319..4045947 + 542 30065134 aldB S4142 - aldehyde dehydrogenase B (lactaldehyde dehydrogenase) 3557 52.98 0 4046643..4047146 - 167 30065135 - S4143 - IS1 orfB 3558 52.54 0 4047065..4047340 - 91 30065136 - S4144 - IS1 orfA 3559 50.89 0 4047374..4048666 - 430 30065137 - S4145 - hypothetical protein 3560 53.17 0 4049001..4049504 - 167 30065138 - S4147 - IS1 orfB 3561 52.54 0 4049423..4049698 - 91 30065139 - S4148 - IS1 orfA 3562 53.65 0 4049913..4050911 - 332 30065140 yiaK S4150 - 2,3-diketo-L-gulonate reductase 3563 52.18 0 4051111..4051959 + 282 30065141 yiaJ S4151 - putative regulator 3564 53.80 0 4052061..4052534 + 157 30065142 yiaI S4152 - hypothetical protein 3565 52.39 0 4052685..4053938 - 417 30065143 avtA S4153 - valine--pyruvate transaminase 3566 52.29 0 4054116..4056146 - 676 30065144 malS S4154 - periplasmic alpha-amylase precursor 3567 47.64 0 4056466..4057290 + 274 30065145 bax S4155 - hypothetical protein 3568 53.55 0 4058654..4059835 - 393 30065146 xylH S4157 - putative xylose transporter, membrane component 3569 47.02 -1 4059813..4061354 - 513 30065147 xylG S4158 - xylose transporter ATP-binding subunit 3570 43.30 -2 4061432..4062424 - 330 30065148 xylF S4159 - D-xylose transporter subunit XylF 3571 54.16 0 4064184..4065638 + 484 30065149 xylB S4161 - xylulokinase 3572 40.94 -2 4065807..4066148 + 113 30065150 yiaB S4162 - hypothetical protein 3573 42.01 -2 4066194..4066631 + 145 30065151 yiaA S4163 - hypothetical protein 3574 46.69 -1 4066673..4067668 - 331 30065152 yiaH S4164 - hypothetical protein 3575 55.81 +1 4068237..4069148 + 303 30065153 glyQ S4165 - glycyl-tRNA synthetase subunit alpha 3576 55.70 +1 4069158..4071227 + 689 30065154 glyS S4166 - glycyl-tRNA synthetase subunit beta 3577 52.58 0 4071285..4071788 - 167 30065155 - S4167 - IS1 orfB 3578 52.54 0 4071707..4071982 - 91 30065156 - S4168 - IS1 orfA 3579 50.84 0 4072203..4072499 + 98 30065157 - S4169 - hypothetical protein 3580 42.11 -2 4076000..4076728 - 242 30065158 yhiW S4171 - putative ARAC-type regulatory protein 3581 41.21 -2 4077096..4077920 - 274 30065159 yhiX S4172 - DNA-binding transcriptional regulator GadX 3582 53.89 0 4078290..4079690 - 466 30065160 gadA S4173 - glutamate decarboxylase isozyme 3583 48.50 0 4079901..4081298 - 465 30065161 yhjA S4174 - putative cytochrome C peroxidase 3584 52.98 0 4081357..4081860 - 167 30065162 - S4175 - IS1 orfB 3585 52.90 0 4081779..4082054 - 91 30065163 - S4177 - IS1 orfA 3586 42.96 -2 4082600..4083451 + 283 30065164 - S4178 - IS150 putative transposase 3587 48.36 0 4083892..4084104 - 70 30065165 cspA S4179 - major cold shock protein 3588 40.48 -2 4084550..4084675 - 41 30065166 yiaG S4180 - hypothetical protein 3589 49.70 0 4084989..4085819 + 276 30065167 yiaF S4181 - hypothetical protein 3590 52.00 0 4085869..4086843 - 324 30065168 yiaE S4182 - 2-hydroxyacid dehydrogenase 3591 59.33 +1 4086947..4087573 - 208 30065169 yiaD S4183 - putative outer membrane lipoprotein 3592 54.56 0 4087814..4090093 + 759 30065170 bisC S4184 - biotin sulfoxide reductase 3593 52.15 0 4090062..4090502 - 146 30065171 yiaC S4185 - hypothetical protein 3594 49.82 0 4090499..4091062 - 187 30065172 tag S4186 - 3-methyl-adenine DNA glycosylase I 3595 49.93 0 4091220..4091918 + 232 30065173 yhjY S4187 - putative lipase 3596 51.53 0 4092147..4093355 + 402 30065174 yhjX S4188 - putative resistance protein 3597 50.30 0 4093679..4095370 + 563 161486388 yhjW S4189 - phosphoethanolamine transferase 3598 51.87 0 4096282..4097889 + 535 30065176 dppA S4191 - dipeptide transport protein 3599 56.18 +1 4098197..4099216 + 339 30065177 dppB S4192 - dipeptide transporter permease DppB 3600 58.91 +1 4099226..4100128 + 300 30065178 dppC S4193 - dipeptide transporter 3601 55.89 +1 4100139..4101122 + 327 30065179 dppD S4194 - dipeptide transporter ATP-binding subunit 3602 55.82 +1 4101119..4102123 + 334 30065180 dppF S4195 - dipeptide transporter ATP-binding subunit 3603 44.97 -1 4102153..4103424 - 423 30065181 yhjV S4196 - putative transporter protein 3604 52.26 0 4104577..4106256 - 559 30065182 yhjU S4197 - hypothetical protein 3605 47.92 0 4106253..4106444 - 63 30065183 yhjT S4198 - hypothetical protein 3606 48.92 0 4106441..4108012 - 523 30065184 yhjS S4199 - putative protease 3607 46.03 -1 4108285..4108473 + 62 30065185 yhjR S4200 - hypothetical protein 3608 54.05 0 4108485..4109237 + 250 30065186 yhjQ S4201 - cell division protein 3609 54.76 0 4111892..4114201 + 769 30065187 yhjN S4203 - cellulose synthase regulator protein 3610 54.11 0 4114208..4115314 + 368 30065188 yhjM S4204 - endo-1,4-D-glucanase 3611 52.41 0 4117746..4119695 + 649 30065189 yhjK S4206 - putative phosphodiesterase 3612 51.67 0 4119885..4121171 + 428 30065190 dctA S4207 - C4-dicarboxylate transporter DctA 3613 54.04 0 4121392..4122888 + 498 30065191 yhjJ S4208 - hypothetical protein 3614 54.48 0 4122984..4124132 - 382 30065192 kdgK S4209 - ketodeoxygluconokinase 3615 52.86 0 4124145..4124912 + 255 30065193 yhjH S4210 - EAL domain-containing protein 3616 52.98 0 4124982..4127042 + 686 30065194 yhjG S4211 - hypothetical protein 3617 56.01 +1 4127224..4128546 - 440 30065195 yhjE S4212 - putative transport protein 3618 52.66 0 4128957..4129970 - 337 30065196 yhjD S4213 - hypothetical protein 3619 52.16 0 4130019..4130990 - 323 30065197 yhjC S4214 - putative transcriptional regulator LYSR-type 3620 47.93 0 4131438..4132040 + 200 30065198 yhjB S4215 - putative regulator 3621 54.25 0 4132056..4133384 - 442 30065199 - S4216 - IS4 orf 3622 53.88 0 4133529..4135178 - 549 30065200 treF S4217 - trehalase 3623 52.90 0 4135449..4135724 + 91 30065201 - S4218 - IS1 orfA 3624 52.78 0 4135643..4136146 + 167 30065202 - S4219 - IS1 orfB 3625 32.95 -2 4137898..4138425 - 175 30065203 yhiE S4221 - hypothetical protein 3626 46.77 -1 4139224..4139796 - 190 30065204 hdeD S4222 - acid-resistance membrane protein 3627 42.64 -2 4140051..4140383 + 110 30065205 hdeA S4223 - acid-resistance protein 3628 39.53 -2 4140487..4140825 + 112 30065206 hdeB S4224 - acid-resistance protein 3629 38.98 -2 4141577..4142107 - 176 30065207 yhiF S4226 - hypothetical protein 3630 44.67 -1 4142263..4142862 - 199 30065208 slp S4227 - outer membrane protein induced after carbon starvation 3631 45.87 -1 4144880..4145836 - 318 30065209 - S4229 - hypothetical protein 3632 52.78 0 4145867..4146370 - 167 30065210 - S4230 - IS1 orfB 3633 52.90 0 4146289..4146564 - 91 30065211 - S4231 - IS1 orfA 3634 49.86 0 4146620..4146964 + 114 30065212 arsR S4232 - DNA-binding transcriptional repressor ArsR 3635 54.50 0 4147018..4148307 + 429 30065213 arsB S4233 - arsenical pump membrane protein 3636 52.11 0 4148320..4148745 + 141 30065214 arsC S4234 - arsenate reductase 3637 52.90 0 4148901..4149176 + 91 30065215 - S4235 - IS1 orfB 3638 52.98 0 4149095..4149598 + 167 30065216 - S4236 - IS1 orfB 3639 54.32 0 4150511..4151863 - 450 30065217 gor S4237 - glutathione reductase 3640 55.28 0 4151935..4152777 - 280 30065218 yhiR S4238 - hypothetical protein 3641 55.21 0 4152980..4155022 + 680 30065219 prlC S4239 - oligopeptidase A 3642 59.10 +1 4155030..4155782 + 250 30065220 yhiQ S4240 - putative methyltransferase 3643 48.51 0 4157618..4158052 - 144 30065221 uspA S4242 - universal stress protein 3644 47.02 -1 4158446..4158781 + 111 30065222 yhiO S4243 - universal stress protein UspB 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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