version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3271 45.44 -1 3713930..3714862 + 310 30064848 yihG S3814 - putative endonuclease 3272 41.28 -2 3714903..3716375 - 490 30064849 yihF S3815 - hypothetical protein 3273 48.01 0 3716488..3717114 - 208 30064850 dsbA S3816 - periplasmic protein disulfide isomerase I 3274 48.23 0 3717131..3718117 - 328 30064851 yihE S3817 - serine/threonine protein kinase 3275 45.19 -1 3718194..3718463 - 89 30064852 yihD S3818 - hypothetical protein 3276 50.94 0 3718533..3719117 + 194 30064853 mobA S3819 - molybdopterin-guanine dinucleotide biosynthesis protein A 3277 48.48 0 3719099..3719626 + 175 30064854 mobB S3820 - molybdopterin-guanine dinucleotide biosynthesis protein B 3278 51.47 0 3725208..3725753 - 181 30064855 hemG S3826 - protoporphyrinogen oxidase 3279 52.62 0 3725765..3727216 - 483 30064856 trkH S3827 - potassium transporter 3280 55.61 0 3727255..3727869 - 204 30064857 yigZ S3828 - hypothetical protein 3281 53.53 0 3727869..3729200 - 443 30064858 pepQ S3829 - proline dipeptidase 3282 55.11 0 3729390..3731579 + 729 30064859 fadB S3830 - multifunctional fatty acid oxidation complex subunit alpha 3283 58.25 +1 3731589..3732752 + 387 30064860 fadA S3831 - 3-ketoacyl-CoA thiolase 3284 52.71 0 3732944..3733645 - 233 30064861 fre S3832 - FMN reductase 3285 53.61 0 3733691..3735184 - 497 30064862 yigC S3833 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3286 49.90 0 3735351..3735839 + 162 30064863 rfaH S3834 - transcriptional activator RfaH 3287 54.92 0 3735836..3736618 - 260 30064864 yigW S3836 - DNase TatD 3288 51.35 0 3736660..3737436 - 258 30064865 yigU S3837 - TatABCE protein translocation system subunit 3289 55.43 0 3737439..3737954 - 171 30064866 - S3838 - sec-independent translocase 3290 44.87 -1 3737958..3738269 - 103 30064867 tatA S3840 - twin argininte translocase protein A 3291 50.09 0 3738306..3739946 - 546 30064868 ubiB S3841 - putative ubiquinone biosynthesis protein UbiB 3292 55.61 0 3739943..3740548 - 201 30064869 yigP S3842 - hypothetical protein 3293 51.98 0 3740562..3741317 - 251 30064870 ubiE S3843 - ubiquinone/menaquinone biosynthesis methyltransferase 3294 52.87 0 3741412..3742824 - 470 30064871 yigN S3844 - DNA recombination protein RmuC 3295 53.67 0 3742980..3743741 - 253 30064872 udp S3845 - uridine phosphorylase 3296 54.69 0 3744111..3744419 - 102 30064873 - S3847 - hypothetical protein 3297 55.75 +1 3744856..3747117 - 753 30064874 metE S3848 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3298 56.39 +1 3747353..3748306 + 317 30064875 metR S3849 - regulator for metE and metH 3299 54.89 0 3748194..3749093 - 299 30064876 yigM S3850 - hypothetical protein 3300 51.56 0 3749169..3749969 - 266 30064877 yigL S3851 - putative sugar phosphatase 3301 53.67 0 3749977..3750999 - 340 30064878 pldB S3852 - lysophospholipase L2 3302 50.36 0 3751314..3751730 + 138 30064879 yigK S3853 - hypothetical protein 3303 50.95 0 3751792..3752160 - 122 30064880 yigJ S3854 - hypothetical protein 3304 54.85 0 3752476..3754311 - 611 30064881 recQ S3855 - ATP-dependent DNA helicase RecQ 3305 51.15 0 3754438..3755307 - 289 30064882 pldA S3856 - phospholipase A 3306 53.21 0 3755472..3755939 + 155 161486406 yigI S3857 - hypothetical protein 3307 50.73 0 3755991..3756881 + 296 30064884 rarD S3858 - hypothetical protein 3308 32.85 -2 3756940..3757356 + 138 30064885 yigG S3859 - hypothetical protein 3309 34.12 -2 3757370..3757750 + 126 30064886 yigF S3860 - hypothetical protein 3310 52.68 0 3757791..3758741 - 316 30064887 corA S3861 - magnesium/nickel/cobalt transporter CorA 3311 49.85 0 3759111..3759449 + 112 30064888 yigE S3862 - hypothetical protein 3312 54.18 0 3759460..3760788 - 442 30064889 - S3863 - IS4 orf 3313 45.33 -1 3761014..3761313 + 99 30064890 - S3864 - hypothetical protein 3314 57.47 +1 3761460..3763622 - 720 30064891 uvrD S3865 - DNA-dependent helicase II 3315 55.09 0 3763706..3764422 - 238 30064892 yigB S3866 - flavin mononucleotide phosphatase 3316 54.07 0 3764422..3765318 - 298 30064893 xerC S3867 - site-specific tyrosine recombinase XerC 3317 55.93 +1 3765315..3766022 - 235 30064894 yigA S3868 - hypothetical protein 3318 55.15 0 3766019..3766843 - 274 161486405 dapF S3869 - diaminopimelate epimerase 3319 52.45 0 3766880..3767083 - 67 30064896 yifL S3870 - putative outer membrane lipoprotein 3320 50.48 0 3767386..3768423 + 345 30064897 - S3871 - hypothetical protein 3321 53.17 0 3769659..3770162 - 167 30064898 - S3874 - IS1 orfB 3322 53.26 0 3770081..3770356 - 91 30064899 - S3875 - IS1 orfA 3323 53.58 0 3770885..3771205 + 106 30064900 cyaY S3876 - frataxin-like protein 3324 52.30 0 3771245..3773791 - 848 30064901 cyaA S3878 - adenylate cyclase 3325 55.94 +1 3774178..3775119 + 313 30064902 hemC S3879 - porphobilinogen deaminase 3326 53.04 0 3775116..3775856 + 246 30064903 hemD S3880 - uroporphyrinogen-III synthase 3327 53.42 0 3775878..3777077 + 399 30064904 hemX S3881 - putative uroporphyrinogen III C-methyltransferase 3328 54.30 0 3777080..3778276 + 398 30064905 hemY S3882 - putative protoheme IX biogenesis protein 3329 53.01 0 3779138..3779503 + 121 161486404 - S3883 - insertion sequence 2 OrfA protein 3330 55.19 0 3779461..3780366 + 301 161486403 - S3884 - insertion element IS2 transposase InsD 3331 51.21 0 3780536..3781771 - 411 30064908 aslB S3885 - putative arylsulfatase regulator 3332 53.25 0 3782457..3783842 - 461 30064909 yifK S3890 - putative transport protein YifK 3333 53.31 0 3784033..3784773 - 246 30064910 wecG S3891 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3334 51.88 0 3784776..3786128 - 450 30064911 wecF S3892 - putative entero common antigen polymerase 3335 52.41 0 3786125..3787204 - 359 30064912 yifM S3893 - 4-alpha-L-fucosyltransferase 3336 53.24 0 3787201..3788451 - 416 30064913 wzxE S3894 - putative cytochrome 3337 54.47 0 3788453..3789583 - 376 30064914 wecE S3895 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3338 54.76 0 3789588..3790133 - 181 30064915 wecD S3896 - TDP-fucosamine acetyltransferase 3339 54.99 0 3790240..3791121 - 293 30064916 rffH S3897 - glucose-1-phosphate thymidylyltransferase 3340 53.56 0 3791140..3792207 - 355 30064917 rffG S3898 - dTDP-glucose 4,6-dehydratase 3341 53.76 0 3792207..3793469 - 420 30064918 wecC S3899 - UDP-N-acetyl-D-mannosamine dehydrogenase 3342 52.69 0 3793466..3794638 - 390 30064919 wecB S3900 - UDP-N-acetyl glucosamine-2-epimerase 3343 52.44 0 3794652..3795698 - 348 30064920 wzzE S3901 - lipopolysaccharide biosynthesis protein WzzE 3344 49.28 0 3795710..3796813 - 367 30064921 rfe S3902 - UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3345 50.24 0 3797053..3798312 - 419 30064922 rho S3903 - transcription termination factor Rho 3346 49.02 0 3798397..3798498 - 33 30064923 rhoL S3904 - putative Rho operon leader peptide 3347 50.00 0 3798639..3799022 - 127 30064924 trxA S3905 - thioredoxin 3348 52.45 0 3799099..3800364 + 421 30064925 rhlB S3906 - ATP-dependent RNA helicase RhlB 3349 53.54 0 3800498..3801982 + 494 30064926 gppA S3907 - guanosine pentaphosphate phosphohydrolase 3350 53.56 0 3802029..3804050 - 673 30064927 rep S3908 - ATP-dependent DNA helicase Rep 3351 51.06 0 3804137..3804418 + 93 30064928 ppiC S3909 - peptidyl-prolyl cis-trans isomerase C (rotamase C) 3352 53.52 0 3804464..3805939 - 491 30064929 ilvC S3910 - ketol-acid reductoisomerase 3353 57.58 +1 3806089..3806979 + 296 30064930 ilvY S3911 - DNA-binding transcriptional regulator IlvY 3354 58.64 +1 3806976..3808520 - 514 30064931 ilvA S3912 - threonine dehydratase 3355 56.46 +1 3808523..3810373 - 616 30064932 ilvD S3913 - dihydroxy-acid dehydratase 3356 54.41 0 3810438..3811367 - 309 30064933 ilvE S3914 - branched-chain amino acid aminotransferase 3357 49.43 0 3811387..3811647 - 86 30064934 ilvM S3915 - acetolactate synthase 2 regulatory subunit 3358 54.58 0 3811647..3813293 - 548 30064935 ilvG S3917 - acetolactate synthase 2 catalytic subunit 3359 53.54 0 3813432..3813530 - 32 30064936 ilvL S3918 - ilvG operon leader peptide 3360 48.08 0 3815386..3815724 - 112 30064937 yifE S3920 - hypothetical protein 3361 48.69 0 3815843..3816682 + 279 30064938 yifA S3921 - transcriptional regulator HdfR 3362 49.54 0 3822630..3823178 + 182 30064939 yieP S3929 - hypothetical protein 3363 49.36 0 3823225..3824628 + 467 30064940 yieO S3930 - putative transport protein 3364 50.41 0 3824594..3825577 - 327 30064941 rbsR S3931 - transcriptional repressor RbsR 3365 52.28 0 3825590..3826534 - 314 30064942 rbsK S3932 - ribokinase 3366 53.00 0 3827560..3828525 - 321 30064943 rbsC S3934 - ribose ABC transporter permease protein 3367 52.98 0 3829707..3830210 - 167 30064944 - S3936 - IS1 orfB 3368 52.90 0 3830129..3830404 - 91 30064945 - S3937 - IS1 orfA 3369 46.90 -1 3830819..3831238 - 139 30064946 rbsD S3939 - D-ribose pyranase 3370 51.47 0 3831405..3833273 - 622 30064947 trkD S3940 - potassium transport protein Kup 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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