version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3233 52.54 0 3670191..3670466 + 91 30064810 - S3775 - IS1 orfA 3234 52.98 0 3670385..3670888 + 167 30064811 - S3776 - IS1 orfB 3235 53.12 0 3670960..3671793 - 277 30064812 fdhD S3777 - formate dehydrogenase accessory protein 3236 55.03 0 3671987..3675037 + 1016 30064813 fdoG S3778 - formate dehydrogenase-O, major subunit 3237 55.59 0 3675050..3675952 + 300 30064814 fdoH S3779 - formate dehydrogenase-O, iron-sulfur subunit 3238 52.36 0 3675949..3676584 + 211 30064815 fdoI S3780 - formate dehydrogenase-O subunit gamma 3239 55.38 0 3676581..3677510 + 309 30064816 fdhE S3781 - formate dehydrogenase accessory protein FdhE 3240 45.68 -1 3677840..3678082 - 80 30064817 yiiF S3782 - hypothetical protein 3241 45.93 -1 3678300..3678545 - 81 30064818 yiiE S3783 - hypothetical protein 3242 39.79 -2 3679197..3680342 - 381 30064819 - S4827 - hypothetical protein 3243 35.71 -2 3680500..3680751 - 83 30064820 - S4828 - hypothetical protein 3244 52.90 0 3680897..3681172 + 91 30064821 - S3784 - IS1 orfA 3245 53.37 0 3681091..3681594 + 167 30064822 - S3785 - IS1 orfB 3246 54.95 0 3682136..3683125 - 329 30064823 yiiD S3786 - putative acetyltransferase 3247 55.25 0 3683122..3683559 - 145 30064824 yihZ S3787 - D-tyrosyl-tRNA deacylase 3248 50.74 0 3683556..3684428 - 290 30064825 rbn S3788 - ribonuclease BN 3249 50.17 0 3684422..3685021 - 199 30064826 yihX S3789 - phosphatase 3250 52.29 0 3685120..3685905 - 261 30064827 yihW S3790 - putative DEOR-type transcriptional regulator 3251 55.74 +1 3685939..3686835 - 298 30064828 yihV S3791 - putative kinase 3252 55.30 0 3687003..3687899 + 298 30064829 yihU S3792 - putative dehydrogenase 3253 53.70 0 3687923..3688801 + 292 30064830 yihT S3793 - putative aldolase 3254 53.22 0 3688818..3690059 + 413 30064831 yihS S3794 - hypothetical protein 3255 48.17 0 3690197..3691099 + 300 30064832 yihR S3795 - putative aldose-1-epimerase 3256 53.22 0 3691298..3693334 + 678 30064833 yihQ S3796 - alpha-glucosidase 3257 44.73 -1 3694797..3696200 + 467 30064834 yihO S3798 - putative permease 3258 53.17 0 3696613..3697116 - 167 30064835 - S3800 - IS1 orfB 3259 52.90 0 3697035..3697310 - 91 30064836 - S3801 - IS1 orfA 3260 44.85 -1 3697339..3698397 - 352 30064837 yihN S3802 - putative resistance protein 3261 43.53 -1 3698499..3699479 - 326 30064838 yihM S3803 - hypothetical protein 3262 48.95 0 3699487..3700197 - 236 30064839 yihL S3804 - putative transcriptional regulator 3263 53.12 0 3700414..3702237 - 607 30064840 yihK S3805 - GTP-binding protein 3264 52.84 0 3702610..3704019 + 469 30064841 glnA S3806 - glutamine synthetase 3265 54.48 0 3704192..3705241 + 349 30064842 glnL S3807 - nitrogen regulation protein NR(II) 3266 56.45 +1 3705253..3706662 + 469 30064843 glnG S3808 - nitrogen regulation protein NR(I) 3267 52.84 0 3707113..3708486 - 457 30064844 hemN S3809 - coproporphyrinogen III oxidase 3268 52.35 0 3708675..3709184 - 169 30064845 yihI S3810 - hypothetical protein 3269 51.34 0 3709766..3710398 + 210 161486407 yihA S3811 - GTPase EngB 3270 51.85 0 3710780..3713566 - 928 30064847 polA S3813 - DNA polymerase I 3271 45.44 -1 3713930..3714862 + 310 30064848 yihG S3814 - putative endonuclease 3272 41.28 -2 3714903..3716375 - 490 30064849 yihF S3815 - hypothetical protein 3273 48.01 0 3716488..3717114 - 208 30064850 dsbA S3816 - periplasmic protein disulfide isomerase I 3274 48.23 0 3717131..3718117 - 328 30064851 yihE S3817 - serine/threonine protein kinase 3275 45.19 -1 3718194..3718463 - 89 30064852 yihD S3818 - hypothetical protein 3276 50.94 0 3718533..3719117 + 194 30064853 mobA S3819 - molybdopterin-guanine dinucleotide biosynthesis protein A 3277 48.48 0 3719099..3719626 + 175 30064854 mobB S3820 - molybdopterin-guanine dinucleotide biosynthesis protein B 3278 51.47 0 3725208..3725753 - 181 30064855 hemG S3826 - protoporphyrinogen oxidase 3279 52.62 0 3725765..3727216 - 483 30064856 trkH S3827 - potassium transporter 3280 55.61 0 3727255..3727869 - 204 30064857 yigZ S3828 - hypothetical protein 3281 53.53 0 3727869..3729200 - 443 30064858 pepQ S3829 - proline dipeptidase 3282 55.11 0 3729390..3731579 + 729 30064859 fadB S3830 - multifunctional fatty acid oxidation complex subunit alpha 3283 58.25 +1 3731589..3732752 + 387 30064860 fadA S3831 - 3-ketoacyl-CoA thiolase 3284 52.71 0 3732944..3733645 - 233 30064861 fre S3832 - FMN reductase 3285 53.61 0 3733691..3735184 - 497 30064862 yigC S3833 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3286 49.90 0 3735351..3735839 + 162 30064863 rfaH S3834 - transcriptional activator RfaH 3287 54.92 0 3735836..3736618 - 260 30064864 yigW S3836 - DNase TatD 3288 51.35 0 3736660..3737436 - 258 30064865 yigU S3837 - TatABCE protein translocation system subunit 3289 55.43 0 3737439..3737954 - 171 30064866 - S3838 - sec-independent translocase 3290 44.87 -1 3737958..3738269 - 103 30064867 tatA S3840 - twin argininte translocase protein A 3291 50.09 0 3738306..3739946 - 546 30064868 ubiB S3841 - putative ubiquinone biosynthesis protein UbiB 3292 55.61 0 3739943..3740548 - 201 30064869 yigP S3842 - hypothetical protein 3293 51.98 0 3740562..3741317 - 251 30064870 ubiE S3843 - ubiquinone/menaquinone biosynthesis methyltransferase 3294 52.87 0 3741412..3742824 - 470 30064871 yigN S3844 - DNA recombination protein RmuC 3295 53.67 0 3742980..3743741 - 253 30064872 udp S3845 - uridine phosphorylase 3296 54.69 0 3744111..3744419 - 102 30064873 - S3847 - hypothetical protein 3297 55.75 +1 3744856..3747117 - 753 30064874 metE S3848 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3298 56.39 +1 3747353..3748306 + 317 30064875 metR S3849 - regulator for metE and metH 3299 54.89 0 3748194..3749093 - 299 30064876 yigM S3850 - hypothetical protein 3300 51.56 0 3749169..3749969 - 266 30064877 yigL S3851 - putative sugar phosphatase 3301 53.67 0 3749977..3750999 - 340 30064878 pldB S3852 - lysophospholipase L2 3302 50.36 0 3751314..3751730 + 138 30064879 yigK S3853 - hypothetical protein 3303 50.95 0 3751792..3752160 - 122 30064880 yigJ S3854 - hypothetical protein 3304 54.85 0 3752476..3754311 - 611 30064881 recQ S3855 - ATP-dependent DNA helicase RecQ 3305 51.15 0 3754438..3755307 - 289 30064882 pldA S3856 - phospholipase A 3306 53.21 0 3755472..3755939 + 155 161486406 yigI S3857 - hypothetical protein 3307 50.73 0 3755991..3756881 + 296 30064884 rarD S3858 - hypothetical protein 3308 32.85 -2 3756940..3757356 + 138 30064885 yigG S3859 - hypothetical protein 3309 34.12 -2 3757370..3757750 + 126 30064886 yigF S3860 - hypothetical protein 3310 52.68 0 3757791..3758741 - 316 30064887 corA S3861 - magnesium/nickel/cobalt transporter CorA 3311 49.85 0 3759111..3759449 + 112 30064888 yigE S3862 - hypothetical protein 3312 54.18 0 3759460..3760788 - 442 30064889 - S3863 - IS4 orf 3313 45.33 -1 3761014..3761313 + 99 30064890 - S3864 - hypothetical protein 3314 57.47 +1 3761460..3763622 - 720 30064891 uvrD S3865 - DNA-dependent helicase II 3315 55.09 0 3763706..3764422 - 238 30064892 yigB S3866 - flavin mononucleotide phosphatase 3316 54.07 0 3764422..3765318 - 298 30064893 xerC S3867 - site-specific tyrosine recombinase XerC 3317 55.93 +1 3765315..3766022 - 235 30064894 yigA S3868 - hypothetical protein 3318 55.15 0 3766019..3766843 - 274 161486405 dapF S3869 - diaminopimelate epimerase 3319 52.45 0 3766880..3767083 - 67 30064896 yifL S3870 - putative outer membrane lipoprotein 3320 50.48 0 3767386..3768423 + 345 30064897 - S3871 - hypothetical protein 3321 53.17 0 3769659..3770162 - 167 30064898 - S3874 - IS1 orfB 3322 53.26 0 3770081..3770356 - 91 30064899 - S3875 - IS1 orfA 3323 53.58 0 3770885..3771205 + 106 30064900 cyaY S3876 - frataxin-like protein 3324 52.30 0 3771245..3773791 - 848 30064901 cyaA S3878 - adenylate cyclase 3325 55.94 +1 3774178..3775119 + 313 30064902 hemC S3879 - porphobilinogen deaminase 3326 53.04 0 3775116..3775856 + 246 30064903 hemD S3880 - uroporphyrinogen-III synthase 3327 53.42 0 3775878..3777077 + 399 30064904 hemX S3881 - putative uroporphyrinogen III C-methyltransferase 3328 54.30 0 3777080..3778276 + 398 30064905 hemY S3882 - putative protoheme IX biogenesis protein 3329 53.01 0 3779138..3779503 + 121 161486404 - S3883 - insertion sequence 2 OrfA protein 3330 55.19 0 3779461..3780366 + 301 161486403 - S3884 - insertion element IS2 transposase InsD 3331 51.21 0 3780536..3781771 - 411 30064908 aslB S3885 - putative arylsulfatase regulator 3332 53.25 0 3782457..3783842 - 461 30064909 yifK S3890 - putative transport protein YifK 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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