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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3190 58.12 +1 3625873..3628305 - 810 30064767 metL S3729 - bifunctional aspartate kinase II/homoserine dehydrogenase II 3191 54.95 0 3628308..3629468 - 386 30064768 metB S3730 - cystathionine gamma-synthase 3192 51.89 0 3629745..3630062 + 105 30064769 metJ S3731 - transcriptional repressor protein MetJ 3193 51.89 0 3630246..3630854 + 202 30064770 yiiX S3732 - putative peptidoglycan peptidase 3194 48.83 0 3630915..3631127 - 70 30064771 rpmE S3733 - 50S ribosomal protein L31 3195 57.39 +1 3631330..3633528 + 732 30064772 priA S3734 - primosome assembly protein PriA 3196 51.56 0 3633684..3634709 + 341 30064773 cytR S3735 - DNA-binding transcriptional regulator CytR 3197 57.81 +1 3634801..3635760 + 319 30064774 ftsN S3736 - essential cell division protein 3198 52.54 0 3635853..3636383 + 176 30064775 hslV S3737 - ATP-dependent protease peptidase subunit 3199 52.33 0 3636393..3637724 + 443 30064776 hslU S3738 - ATP-dependent protease ATP-binding subunit 3200 53.40 0 3637791..3638717 + 308 30064777 menA S3739 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3201 52.26 0 3638810..3639295 + 161 30064778 menG S3740 - ribonuclease activity regulator protein RraA 3202 48.37 0 3639380..3639625 - 81 30064779 yiiU S3741 - hypothetical protein 3203 50.39 0 3640051..3640695 + 214 30064780 glpF S3742 - glycerol diffusion facilitator protein 3204 54.21 0 3640919..3642427 + 502 30064781 glpK S3743 - glycerol kinase 3205 56.58 +1 3642657..3643667 + 336 30064782 glpX S3744 - fructose 1,6-bisphosphatase II 3206 53.41 0 3643764..3644510 + 248 30064783 fpr S3745 - ferredoxin-NADP reductase 3207 43.12 -2 3644515..3644943 - 142 30064784 yiiT S3746 - universal stress protein UspD 3208 46.67 -1 3644970..3645269 - 99 30064785 yiiS S3747 - hypothetical protein 3209 49.00 0 3646022..3646621 + 199 30064786 yiiQ S3749 - hypothetical protein 3210 52.86 0 3646729..3647496 + 255 30064787 tpiA S3750 - triosephosphate isomerase 3211 48.68 0 3647551..3648306 - 251 30064788 cdh S3751 - CDP-diacylglycerol pyrophosphatase 3212 51.11 0 3648413..3649402 - 329 30064789 sbp S3752 - sulfate transporter subunit 3213 54.07 0 3649722..3650666 - 314 30064790 pfkA S3753 - 6-phosphofructokinase 3214 52.27 0 3650865..3651767 - 300 30064791 fieF S3754 - ferrous iron efflux protein F 3215 50.10 0 3651915..3652415 - 166 161486410 cpxP S3755 - periplasmic repressor CpxP 3216 51.22 0 3652565..3653263 + 232 30064793 cpxR S3757 - DNA-binding transcriptional regulator CpxR 3217 54.51 0 3653260..3654633 + 457 30064794 cpxA S3758 - two-component sensor protein 3218 53.48 0 3654739..3655413 - 224 30064795 yiiM S3759 - hypothetical protein 3219 53.28 0 3655640..3656005 + 121 161486409 - S3760 - insertion sequence 2 OrfA protein 3220 55.19 0 3655963..3656868 + 301 161486408 - S3761 - insertion element IS2 transposase InsD 3221 52.74 0 3656898..3657881 - 327 30064798 kdgT S3762 - 2-keto-3-deoxygluconate permease 3222 53.62 0 3658141..3658761 - 206 30064799 sodA S3763 - superoxide dismutase 3223 49.84 0 3660077..3661015 - 312 30064800 rhaR S3765 - transcriptional activator RhaR 3224 51.73 0 3660999..3661835 - 278 30064801 rhaS S3766 - transcriptional activator RhaS 3225 55.24 0 3662123..3663592 + 489 30064802 rhaB S3767 - rhamnulokinase 3226 56.27 +1 3663589..3664848 + 419 30064803 rhaA S3768 - L-rhamnose isomerase 3227 54.52 0 3665273..3665914 + 213 30064804 rhaD S3769 - rhamnulose-1-phosphate aldolase 3228 49.84 0 3665924..3666238 + 104 30064805 yiiL S3770 - hypothetical protein 3229 50.34 0 3666539..3666985 + 148 30064806 frvA S3771 - putative fructose-like phosphotransferase system subunit EIIA 3230 55.79 +1 3666996..3668447 + 483 30064807 frvB S3772 - putative PTS transporter components IIBC 3231 52.66 0 3668437..3669507 + 356 30064808 frvX S3773 - putative fructose-specific phosphotransferase system protein FrvX 3232 52.84 0 3669507..3670157 + 216 30064809 frvR S3774 - putative frv operon regulatory protein 3233 52.54 0 3670191..3670466 + 91 30064810 - S3775 - IS1 orfA 3234 52.98 0 3670385..3670888 + 167 30064811 - S3776 - IS1 orfB 3235 53.12 0 3670960..3671793 - 277 30064812 fdhD S3777 - formate dehydrogenase accessory protein 3236 55.03 0 3671987..3675037 + 1016 30064813 fdoG S3778 - formate dehydrogenase-O, major subunit 3237 55.59 0 3675050..3675952 + 300 30064814 fdoH S3779 - formate dehydrogenase-O, iron-sulfur subunit 3238 52.36 0 3675949..3676584 + 211 30064815 fdoI S3780 - formate dehydrogenase-O subunit gamma 3239 55.38 0 3676581..3677510 + 309 30064816 fdhE S3781 - formate dehydrogenase accessory protein FdhE 3240 45.68 -1 3677840..3678082 - 80 30064817 yiiF S3782 - hypothetical protein 3241 45.93 -1 3678300..3678545 - 81 30064818 yiiE S3783 - hypothetical protein 3242 39.79 -2 3679197..3680342 - 381 30064819 - S4827 - hypothetical protein 3243 35.71 -2 3680500..3680751 - 83 30064820 - S4828 - hypothetical protein 3244 52.90 0 3680897..3681172 + 91 30064821 - S3784 - IS1 orfA 3245 53.37 0 3681091..3681594 + 167 30064822 - S3785 - IS1 orfB 3246 54.95 0 3682136..3683125 - 329 30064823 yiiD S3786 - putative acetyltransferase 3247 55.25 0 3683122..3683559 - 145 30064824 yihZ S3787 - D-tyrosyl-tRNA deacylase 3248 50.74 0 3683556..3684428 - 290 30064825 rbn S3788 - ribonuclease BN 3249 50.17 0 3684422..3685021 - 199 30064826 yihX S3789 - phosphatase 3250 52.29 0 3685120..3685905 - 261 30064827 yihW S3790 - putative DEOR-type transcriptional regulator 3251 55.74 +1 3685939..3686835 - 298 30064828 yihV S3791 - putative kinase 3252 55.30 0 3687003..3687899 + 298 30064829 yihU S3792 - putative dehydrogenase 3253 53.70 0 3687923..3688801 + 292 30064830 yihT S3793 - putative aldolase 3254 53.22 0 3688818..3690059 + 413 30064831 yihS S3794 - hypothetical protein 3255 48.17 0 3690197..3691099 + 300 30064832 yihR S3795 - putative aldose-1-epimerase 3256 53.22 0 3691298..3693334 + 678 30064833 yihQ S3796 - alpha-glucosidase 3257 44.73 -1 3694797..3696200 + 467 30064834 yihO S3798 - putative permease 3258 53.17 0 3696613..3697116 - 167 30064835 - S3800 - IS1 orfB 3259 52.90 0 3697035..3697310 - 91 30064836 - S3801 - IS1 orfA 3260 44.85 -1 3697339..3698397 - 352 30064837 yihN S3802 - putative resistance protein 3261 43.53 -1 3698499..3699479 - 326 30064838 yihM S3803 - hypothetical protein 3262 48.95 0 3699487..3700197 - 236 30064839 yihL S3804 - putative transcriptional regulator 3263 53.12 0 3700414..3702237 - 607 30064840 yihK S3805 - GTP-binding protein 3264 52.84 0 3702610..3704019 + 469 30064841 glnA S3806 - glutamine synthetase 3265 54.48 0 3704192..3705241 + 349 30064842 glnL S3807 - nitrogen regulation protein NR(II) 3266 56.45 +1 3705253..3706662 + 469 30064843 glnG S3808 - nitrogen regulation protein NR(I) 3267 52.84 0 3707113..3708486 - 457 30064844 hemN S3809 - coproporphyrinogen III oxidase 3268 52.35 0 3708675..3709184 - 169 30064845 yihI S3810 - hypothetical protein 3269 51.34 0 3709766..3710398 + 210 161486407 yihA S3811 - GTPase EngB 3270 51.85 0 3710780..3713566 - 928 30064847 polA S3813 - DNA polymerase I 3271 45.44 -1 3713930..3714862 + 310 30064848 yihG S3814 - putative endonuclease 3272 41.28 -2 3714903..3716375 - 490 30064849 yihF S3815 - hypothetical protein 3273 48.01 0 3716488..3717114 - 208 30064850 dsbA S3816 - periplasmic protein disulfide isomerase I 3274 48.23 0 3717131..3718117 - 328 30064851 yihE S3817 - serine/threonine protein kinase 3275 45.19 -1 3718194..3718463 - 89 30064852 yihD S3818 - hypothetical protein 3276 50.94 0 3718533..3719117 + 194 30064853 mobA S3819 - molybdopterin-guanine dinucleotide biosynthesis protein A 3277 48.48 0 3719099..3719626 + 175 30064854 mobB S3820 - molybdopterin-guanine dinucleotide biosynthesis protein B 3278 51.47 0 3725208..3725753 - 181 30064855 hemG S3826 - protoporphyrinogen oxidase 3279 52.62 0 3725765..3727216 - 483 30064856 trkH S3827 - potassium transporter 3280 55.61 0 3727255..3727869 - 204 30064857 yigZ S3828 - hypothetical protein 3281 53.53 0 3727869..3729200 - 443 30064858 pepQ S3829 - proline dipeptidase 3282 55.11 0 3729390..3731579 + 729 30064859 fadB S3830 - multifunctional fatty acid oxidation complex subunit alpha 3283 58.25 +1 3731589..3732752 + 387 30064860 fadA S3831 - 3-ketoacyl-CoA thiolase 3284 52.71 0 3732944..3733645 - 233 30064861 fre S3832 - FMN reductase 3285 53.61 0 3733691..3735184 - 497 30064862 yigC S3833 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3286 49.90 0 3735351..3735839 + 162 30064863 rfaH S3834 - transcriptional activator RfaH 3287 54.92 0 3735836..3736618 - 260 30064864 yigW S3836 - DNase TatD 3288 51.35 0 3736660..3737436 - 258 30064865 yigU S3837 - TatABCE protein translocation system subunit 3289 55.43 0 3737439..3737954 - 171 30064866 - S3838 - sec-independent translocase 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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