version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 236 53.24 0 260720..261814 - 364 30061809 yaiW S0257 - hypothetical protein 237 51.02 0 261827..263047 - 406 30061810 sbmA S0258 - transport protein 238 54.75 0 263399..264556 + 385 30061811 yaiH S0259 - beta-lactamase/D-alanine carboxypeptidase 239 50.43 0 265695..266507 - 270 30061812 - S0262 - ISEhe3 orfB 240 52.10 0 266781..267494 - 237 30061813 - S0263 - IS600 orfB 241 46.53 -1 267635..267937 - 100 30061814 is600a S0264 - IS600 orfA 242 55.19 0 268714..269619 - 301 161486542 yi22_6 S0266 - insertion element IS2 transposase InsD 243 53.01 0 269577..269942 - 121 161486541 yi21_6 S0267 - insertion sequence 2 OrfA protein 244 29.63 -2 270487..270756 + 89 30061817 - S0269 - hypothetical protein 245 53.77 0 270893..271900 + 335 30061818 hemB S0270 - delta-aminolevulinic acid dehydratase 246 54.58 0 272006..272857 - 283 30061819 tauD S0271 - taurine dioxygenase 247 58.33 +1 272854..273681 - 275 30061820 tauC S0272 - taurine transporter subunit 248 55.99 +1 273678..274445 - 255 30061821 tauB S0273 - taurine transporter ATP-binding subunit 249 56.52 +1 274458..275354 - 298 30061822 tauA S0274 - taurine transporter substrate binding subunit 250 52.98 0 275912..276415 - 167 30061823 - S0275 - IS1 orfB 251 52.90 0 276334..276609 - 91 30061824 - S0276 - IS1 orfA 252 37.22 -2 276754..277422 + 222 30061825 ykgH S0277 - hypothetical protein 253 42.25 -2 277498..277710 + 70 30061826 - S0278 - hypothetical protein 254 52.30 0 277665..278360 - 231 161486540 ykgG S0279 - putative transporter 255 50.42 0 278353..279780 - 475 30061828 ykgF S0280 - hypothetical protein 256 50.14 0 279791..280510 - 239 30061829 ykgE S0281 - putative dehydrogenase subunit 257 52.90 0 280929..281204 + 91 30061830 - S0282 - IS1 orfA 258 52.98 0 281123..281626 + 167 30061831 - S0283 - IS1 orfB 259 54.11 0 282704..284917 + 737 30061832 rhsG S0284 - putative Rhs-family protein 260 47.26 -1 284940..285140 + 66 30061833 - S0285 - cytoplasmic protein 261 48.68 0 285197..285385 + 62 30061834 - S0286 - putative cytoplasmic protein 262 54.17 0 285407..285814 + 135 30061835 - S0287 - putative Rhs-family protein 263 59.50 +1 285811..288099 + 762 30061836 rhsD S0288 - putative Rhs-family protein 264 56.36 +1 288096..289085 + 329 30061837 rhs-like S0289 - putative Rhs-family protein 265 55.12 0 290134..290904 - 256 30061838 yafV S0290 - hypothetical protein 266 50.42 0 291058..291531 + 157 30061839 ykfE S0291 - vertebrate C-lysozyme inhibitor 267 55.99 +1 291574..294018 - 814 161486539 fadE S0292 - acyl-CoA dehydrogenase 268 50.78 0 294258..294836 + 192 30061841 gmhA S0293 - phosphoheptose isomerase 269 53.65 0 295042..295809 + 255 30061842 yafJ S0294 - putative amidotransferase 270 49.26 0 295780..296520 - 246 30061843 yafK S0295 - hypothetical protein 271 54.95 0 296871..297425 + 184 30061844 yafL S0296 - putative lipoprotein 272 45.18 -1 297601..298098 + 165 30061845 yafM S0297 - hypothetical protein 273 58.39 +1 298315..300054 - 579 30061846 fhiA S0299 - flagellar biosynthetic protein FlhA 274 52.29 0 299999..300784 + 261 30061847 mbhA S0298 - hypothetical protein 275 53.88 0 300855..301910 + 351 30061848 dinP S0300 - DNA polymerase IV 276 41.16 -2 301962..302255 + 97 30061849 yafN S0301 - putative antitoxin of the YafO-YafN toxin-antitoxin system 277 43.36 -2 302258..302656 + 132 30061850 yafO S0302 - putative toxin YafO 278 42.83 -2 302666..303118 + 150 30061851 yafP S0303 - hypothetical protein 279 52.87 0 303364..304407 + 347 30061852 - S0304 - hypothetical protein 280 56.36 +1 304523..304978 + 151 30061853 prfH S0305 - peptide chain release factor 2 281 51.44 0 305140..306597 - 485 30061854 pepD S0306 - aminoacyl-histidine dipeptidase (peptidase D) 282 52.07 0 306859..307317 + 152 30061855 gpt S0307 - xanthine-guanine phosphoribosyltransferase 283 53.25 0 307409..308653 + 414 30061856 frsA S0308 - fermentation/respiration switch protein 284 50.00 0 308711..309112 + 133 30061857 crl S0309 - DNA-binding transcriptional regulator Crl 285 45.17 -1 309151..310206 - 351 30061858 phoE S0310 - outer membrane phosphoporin protein E 286 52.54 0 310382..310657 + 91 30061859 - S0311 - IS1 orfA 287 52.78 0 310576..311079 + 167 30061860 - S0312 - IS1 orfB 288 55.80 +1 311270..312373 + 367 30061861 proB S0313 - gamma-glutamyl kinase 289 54.31 0 312385..313638 + 417 30061862 proA S0314 - gamma-glutamyl phosphate reductase 290 46.48 -1 313843..315006 - 387 30061863 - S0316 - putative phage integrase 291 46.20 -1 315192..315494 + 100 30061864 - S0317 - IS600 orfA 292 52.24 0 315635..316348 + 237 30061865 - S0318 - IS600 orfB 293 50.69 0 316401..317051 + 216 30061866 - S0319 - hypothetical protein 294 40.69 -2 316960..317421 + 153 30061867 - S4801 - putative phage tail fibre protein 295 31.62 -2 318229..319278 - 349 30061868 - S4802 - hypothetical protein 296 45.17 -1 319729..320919 + 396 30061869 - S4808 - hypothetical protein 297 31.83 -2 321309..322769 - 486 30061870 gtrII S4803 - putative glucosyl tranferase II 298 42.26 -2 322766..323695 - 309 30061871 gtrBI S0320 - putative bactoprenol glucosyl transferase 299 42.70 -2 323692..324054 - 120 30061872 gtrAI S0321 - putative flippase 300 50.68 0 324316..324609 - 97 30061873 - S0322 - integrase fragment 301 52.24 0 324718..325431 - 237 30061874 - S0323 - IS600 orfB 302 46.53 -1 325572..325874 - 100 30061875 - S0324 - IS600 orfA 303 46.82 -1 326060..327223 + 387 30061876 - S0325 - putative phage integrase 304 33.93 -2 327572..328744 + 390 30061877 - S4804 - hypothetical protein 305 49.43 0 329548..329988 - 146 30061878 - S0326 - IS600 orfB 306 54.43 0 330729..331349 - 206 30061879 - S0327 - IS629 orfB 307 55.25 0 331711..331929 - 72 30061880 - S0328 - IS629, orfA 308 53.67 0 332080..333195 + 371 30061881 yaiC S0329 - diguanylate cyclase AdrA 309 54.81 0 333212..334021 - 269 30061882 proC S0330 - pyrroline-5-carboxylate reductase 310 56.21 +1 334141..334599 + 152 161486538 yaiI S0331 - hypothetical protein 311 52.00 0 334782..335306 + 174 30061884 aroL S0332 - shikimate kinase II 312 48.44 0 335356..335547 + 63 30061885 yaiA S0333 - hypothetical protein 313 46.17 -1 335805..336482 + 225 30061886 aroM S0334 - hypothetical protein 314 51.23 0 336554..336838 + 94 30061887 yaiE S0335 - hypothetical protein 315 48.94 0 337047..337328 + 93 30061888 - S0336 - hypothetical protein 316 43.64 -1 337325..337780 + 151 30061889 - S0337 - hypothetical protein 317 51.54 0 337858..338769 - 303 30061890 rdgC S0339 - recombination associated protein 318 55.70 +1 338894..339787 + 297 161486537 yajF S0338 - fructokinase 319 50.51 0 339945..341126 - 393 30061892 araJ S0341 - protein AraJ 320 54.04 0 341252..344395 - 1047 30061893 sbcC S0342 - exonuclease subunit SbcC 321 53.20 0 344392..345594 - 400 30061894 sbcD S0343 - exonuclease subunit SbcD 322 53.91 0 345784..346473 + 229 30061895 phoB S0344 - transcriptional regulator PhoB 323 53.24 0 346531..347826 + 431 30061896 phoR S0345 - phosphate regulon sensor protein 324 55.53 0 348233..349552 + 439 30061897 brnQ S0346 - branched-chain amino-acid transport system II carrier protein 325 52.55 0 349628..351001 + 457 30061898 proY S0347 - putative proline-specific permease 326 54.35 0 351157..352974 + 605 30061899 malZ S0348 - maltodextrin glucosidase 327 53.97 0 353645..354715 + 356 30061900 queA S0350 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 328 50.71 0 354770..355897 + 375 30061901 tgt S0351 - queuine tRNA-ribosyltransferase 329 49.55 0 355920..356252 + 110 30061902 yajC S0352 - preprotein translocase subunit YajC 330 53.19 0 356280..358127 + 615 30061903 secD S0353 - preprotein translocase subunit SecD 331 51.54 0 358138..359109 + 323 30061904 secF S0354 - preprotein translocase subunit SecF 332 46.55 -1 359238..359585 + 115 30061905 yajD S0355 - hypothetical protein 333 50.51 0 359762..360646 - 294 30061906 tsx S0356 - outer membrane protein Tsx 334 47.22 -1 360944..361483 - 179 161486536 yajI S0357 - hypothetical protein 335 50.67 0 361634..362083 + 149 30061908 ybaD S0358 - transcriptional regulator NrdR 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0