version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2723 53.01 0 3070456..3070821 + 121 161486440 - S3188 - insertion sequence 2 OrfA protein 2724 55.08 0 3070779..3071684 + 301 161486439 - S3189 - insertion element IS2 transposase InsD 2725 53.62 0 3073538..3073744 + 68 30064302 - S3190 - hypothetical protein 2726 51.83 0 3073830..3074402 + 190 30064303 - S3191 - hypothetical protein 2727 47.02 -1 3074404..3074688 - 94 30064304 - S4825 - hypothetical protein 2728 37.45 -2 3075971..3076990 + 339 30064305 - S4826 - hypothetical protein 2729 57.96 +1 3077100..3077972 + 290 30064306 sap S3193 - hypothetical protein 2730 56.26 +1 3078306..3079199 + 297 30064307 - S3194 - outer membrane fluffing protein 2731 58.51 +1 3079305..3081425 + 706 30064308 - S3195 - outer membrane fluffing protein 2732 52.24 0 3081546..3084062 + 838 30064309 - S3196 - hypothetical protein 2733 48.03 0 3084138..3084593 + 151 30064310 - S3197 - hypothetical protein 2734 56.78 +1 3085004..3085822 + 272 30064311 - S3199 - hypothetical protein 2735 55.70 +1 3086164..3086637 + 157 30064312 - S3200 - hypothetical protein 2736 58.33 +1 3086638..3087129 + 163 30064313 yeeS S3201 - RADC family DNA repair protein 2737 52.70 0 3087216..3087437 + 73 30064314 yeeT S3202 - hypothetical protein 2738 60.85 +2 3087517..3087894 + 125 30064315 yeeU S3203 - putative structural protein 2739 54.76 0 3087941..3088318 + 125 30064316 yeeV S3204 - hypothetical protein 2740 53.99 0 3088315..3088803 + 162 30064317 yeeW S3205 - hypothetical protein 2741 47.92 0 3089105..3089947 + 280 30064318 - S3207 - hypothetical protein 2742 50.33 0 3091372..3091671 + 99 30064319 - S3209 - IS3 orfA 2743 55.02 0 3091668..3092534 + 288 30064320 - S3210 - IS3 orfB 2744 42.92 -2 3093171..3093410 - 79 30064321 - S3211 - hypothetical protein 2745 41.58 -2 3093545..3094150 - 201 30064322 - S3212 - hypothetical protein 2746 52.98 0 3094265..3094768 - 167 30064323 - S3213 - IS1 orfB 2747 52.90 0 3094687..3094962 - 91 30064324 - S3214 - IS1 orfA 2748 52.55 0 3096365..3097951 - 528 30064325 yghK S3215 - putative permease 2749 53.50 0 3098306..3100477 - 723 30064326 glcB S3216 - malate synthase G 2750 54.81 0 3100499..3100903 - 134 30064327 glcG S3217 - hypothetical protein 2751 54.99 0 3104940..3105710 + 256 30064328 glcC S3220 - DNA-binding transcriptional regulator GlcC 2752 52.93 0 3107379..3109067 + 562 30064329 - S3222 - acyl-CoA synthetase 2753 54.63 0 3109082..3109978 + 298 30064330 - S3223 - hypothetical protein 2754 40.56 -2 3110011..3110259 + 82 30064331 - S3224 - hypothetical protein 2755 50.71 0 3110259..3110609 + 116 30064332 - S3225 - putative class II aminotransferase 2756 52.72 0 3110642..3111430 + 262 30064333 - S3226 - putative class II aminotransferase 2757 51.30 0 3111466..3112545 - 359 30064334 - S3227 - hypothetical protein 2758 51.26 0 3112542..3113612 - 356 30064335 - S3228 - hypothetical protein 2759 48.66 0 3113643..3114203 - 186 30064336 - S3229 - hypothetical protein 2760 45.70 -1 3114215..3115039 - 274 30064337 - S3230 - hypothetical protein 2761 52.89 0 3115039..3116388 - 449 30064338 yghQ S3231 - hypothetical protein 2762 53.23 0 3116434..3117192 - 252 30064339 yghR S3232 - hypothetical protein 2763 49.58 0 3117224..3117937 - 237 30064340 yghS S3233 - hypothetical protein 2764 47.33 -1 3118111..3118803 + 230 30064341 yghT S3234 - hypothetical protein 2765 51.87 0 3118852..3120351 - 499 30064342 pitB S3235 - low-affinity phosphate transport protein 2766 52.26 0 3120643..3122502 - 619 30064343 gsp S3236 - bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 2767 53.66 0 3122659..3123573 + 304 30064344 - S3237 - putative glutathione S-transferase YghU 2768 53.41 0 3123696..3123944 - 82 30064345 hybG S3238 - hydrogenase 2 accessory protein HypG 2769 55.56 0 3124078..3124419 - 113 30064346 hypA S3239 - hydrogenase nickel incorporation protein HybF 2770 54.81 0 3124412..3124900 - 162 30064347 hybE S3240 - hydrogenase 2-specific chaperone 2771 54.55 0 3124893..3125387 - 164 30064348 hybD S3241 - hydrogenase 2 maturation endopeptidase 2772 53.35 0 3125387..3127090 - 567 30064349 hybC S3242 - hydrogenase 2 large subunit 2773 54.37 0 3127087..3128265 - 392 30064350 hybB S3243 - putative hydrogenase 2 b cytochrome subunit 2774 54.71 0 3128255..3129241 - 328 30064351 hybA S3244 - hydrogenase 2 protein HybA 2775 54.24 0 3129244..3130362 - 372 30064352 - S3245 - hydrogenase 2 small subunit 2776 45.14 -1 3130551..3130838 - 95 30064353 - S3246 - hypothetical protein 2777 51.34 0 3130957..3131367 - 136 30064354 - S3247 - hypothetical protein 2778 51.97 0 3132001..3133041 + 346 30064355 - S3249 - aldo-keto reductase 2779 47.47 -1 3133081..3133575 - 164 30064356 yqhA S3250 - hypothetical protein 2780 54.58 0 3133766..3134650 + 294 30064357 yghA S3251 - oxidoreductase 2781 48.78 0 3134826..3135071 + 81 30064358 - S3252 - hypothetical protein 2782 50.23 0 3134922..3135347 - 141 30064359 exbD S3253 - biopolymer transport protein ExbD 2783 52.65 0 3135354..3136088 - 244 30064360 exbB S3254 - biopolymer transport protein ExbB 2784 41.03 -2 3136081..3136236 - 51 30064361 - S3255 - hypothetical protein 2785 51.68 0 3136340..3137527 + 395 30064362 metC S3256 - cystathionine beta-lyase 2786 50.76 0 3137667..3138326 + 219 30064363 yghB S3257 - hypothetical protein 2787 50.09 0 3138366..3139493 - 375 30064364 yqhC S3259 - putative ARAC-type regulatory protein 2788 54.55 0 3139459..3140622 + 387 30064365 yqhD S3258 - putative oxidoreductase 2789 51.09 0 3140727..3141554 + 275 161486438 dkgA S3260 - 2,5-diketo-D-gluconate reductase A 2790 46.49 -1 3141754..3142680 + 308 30064367 yqhG S3261 - hypothetical protein 2791 47.67 0 3142731..3142988 + 85 30064368 yqhH S3262 - putative outer membrane lipoprotein 2792 52.98 0 3143031..3144272 - 413 30064369 - S3263 - hypothetical protein 2793 56.33 +1 3145361..3146773 - 470 30064370 sufI S3265 - repressor protein for FtsI 2794 49.46 0 3146848..3147585 - 245 30064371 plsC S3266 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2795 54.76 0 3147819..3150077 - 752 30064372 parC S3267 - DNA topoisomerase IV subunit A 2796 53.21 0 3150623..3151105 - 160 30064373 - S3268 - hypothetical protein 2797 50.38 0 3151158..3151550 - 130 30064374 ygiW S3269 - hypothetical protein 2798 51.36 0 3151702..3152361 + 219 30064375 ygiX S3270 - DNA-binding transcriptional regulator QseB 2799 52.55 0 3152358..3153632 + 424 30064376 ygiY S3271 - sensor protein QseC 2800 34.23 -2 3153678..3154010 - 110 30064377 - S3272 - hypothetical protein 2801 49.66 0 3154329..3154910 + 193 30064378 mdaB S3273 - modulator of drug activity B 2802 51.43 0 3154941..3155255 + 104 30064379 ygiN S3274 - hypothetical protein 2803 53.88 0 3155303..3157195 - 630 30064380 parE S3275 - DNA topoisomerase IV subunit B 2804 53.61 0 3157224..3157805 - 193 30064381 yqiA S3276 - esterase YqiA 2805 56.28 +1 3157805..3158632 - 275 30064382 icc S3277 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 2806 48.70 0 3158657..3159079 - 140 30064383 yqiB S3278 - hypothetical protein 2807 50.63 0 3159080..3159709 - 209 30064384 nudF S3279 - ADP-ribose pyrophosphatase NudF 2808 51.42 0 3159914..3161395 + 493 30064385 tolC S3280 - outer membrane channel protein 2809 52.87 0 3161395..3161655 + 86 30064386 ygiA S3281 - hypothetical protein 2810 56.10 +1 3161543..3162214 + 223 161486437 ygiB S3282 - hypothetical protein 2811 50.47 0 3162220..3163380 + 386 30064388 ygiC S3283 - putative synthetase/amidase 2812 53.68 0 3163418..3164233 - 271 30064389 ygiD S3284 - hypothetical protein 2813 53.36 0 3164349..3165122 + 257 30064390 ygiE S3285 - zinc transporter ZupT 2814 52.75 0 3165611..3166264 - 217 30064391 ribB S3286 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 2815 48.15 0 3166578..3166928 + 116 30064392 - S3287 - hypothetical protein 2816 52.73 0 3167184..3167549 + 121 161486436 - S3288 - insertion sequence 2 OrfA protein 2817 55.99 +1 3167507..3168358 + 283 161486435 - S3289 - insertion sequence 2 OrfB protein 2818 52.90 0 3168409..3168684 + 91 30064395 - S3290 - IS1 orfA 2819 52.98 0 3168603..3169106 + 167 30064396 - S3291 - IS1 orfB 2820 49.28 0 3169116..3169391 + 91 30064397 - S3292 - IS4 orf 2821 45.77 -1 3169778..3169978 - 66 30064398 glgS S3294 - glycogen synthesis protein GlgS 2822 54.00 0 3170300..3170599 + 99 30064399 - S3295 - IS1 orfA 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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