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Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 198 61.76 +2 230483..230788 - 101 30061770 safB S0213 - periplasmic chaperone of fimbral assembly machinery 199 59.13 +1 230785..232668 - 627 30061771 safC S0214 - outer membrane usher protein 200 55.76 +1 232684..233178 - 164 30061772 - S0215 - putative cytoplasmic protein 201 59.08 +1 233373..234005 - 210 30061773 sat1 S0217 - putative cytoplasmic protein 202 48.15 0 233992..234369 - 125 30061774 sat2 S0218 - putative cytoplasmic protein 203 45.00 -1 234607..234906 - 99 30061775 - S0219 - putative cytoplasmic protein 204 50.36 0 234959..235369 + 136 30061776 - S0220 - insertion sequence 2 OrfA protein 205 55.41 0 235327..236232 + 301 30061777 - S0221 - insertion element IS2 transposase InsD 206 45.21 -1 236654..236956 + 100 30061778 - S0223 - IS911 orfA 207 54.29 0 236983..237822 + 279 30061779 - S0224 - IS911 orfB 208 50.37 0 238511..238780 - 89 30061781 - S0229 - putative endolysin R of prophage CP-933V 209 46.98 -1 239101..239415 - 104 30061782 - S0230 - hypothetical protein 210 50.00 0 239420..239635 - 71 30061783 - S0231 - lysis protein S 211 46.13 -1 239992..240366 + 124 30061784 - S0232 - hypothetical protein 212 47.30 -1 240390..240797 - 135 30061785 - S0233 - hypothetical protein 213 52.80 0 240794..241846 - 350 30061786 - S0235 - IS911 orfA 214 54.52 0 240794..241633 - 279 30061787 - S0234 - IS911 orfB 215 51.87 0 242170..242730 + 186 30061788 - S0236 - putative terminase large subunit 216 50.93 0 242699..243073 + 124 30061789 - S0237 - putative terminase large subunit 217 51.15 0 243074..245239 + 721 30061790 - S0238 - putative packaging glycoprotein 218 53.40 0 245253..246164 + 303 30061791 - S0239 - putative scaffolding protein 219 51.85 0 246164..247459 + 431 30061792 - S0240 - putative coat protein 220 47.62 0 247504..247734 + 76 30061793 - S0241 - hypothetical protein 221 48.50 0 247712..248212 + 166 30061794 - S0242 - putative DNA stabilization protein 222 50.74 0 248212..249630 + 472 30061795 - S0243 - putative packaged DNA stabilization protein 223 50.65 0 249630..250478 + 282 30061796 - S0244 - putative packaged DNA stabilization protein 224 49.12 0 250478..250933 + 151 30061797 - S0245 - putative head assembly protein 225 51.66 0 250936..251628 + 230 30061798 - S0246 - putative DNA transfer protein 226 51.35 0 251638..252969 + 443 30061799 - S0247 - putative prophage DNA injection protein 227 50.78 0 252970..254700 + 576 30061800 - S0248 - putative DNA transfer protein 228 54.74 0 254826..255152 + 108 30061801 - S0249 - IS629 orfA 229 54.78 0 255387..256034 + 215 30061802 - S0250 - IS629 orfB 230 47.49 -1 256085..256423 - 112 30061803 psiF S0251 - hypothetical protein 231 52.19 0 256524..258008 - 494 30061804 phoA S0252 - alkaline phosphatase 232 45.59 -1 258040..258300 - 86 30061805 yaiB S0253 - hypothetical protein 233 51.32 0 258763..259857 + 364 30061806 ddl S0254 - D-alanyl-alanine synthetase A 234 44.35 -1 259881..260225 - 114 30061807 - S0255 - hypothetical protein 235 52.75 0 260353..260661 + 102 30061808 - S0256 - hypothetical protein 236 53.24 0 260720..261814 - 364 30061809 yaiW S0257 - hypothetical protein 237 51.02 0 261827..263047 - 406 30061810 sbmA S0258 - transport protein 238 54.75 0 263399..264556 + 385 30061811 yaiH S0259 - beta-lactamase/D-alanine carboxypeptidase 239 50.43 0 265695..266507 - 270 30061812 - S0262 - ISEhe3 orfB 240 52.10 0 266781..267494 - 237 30061813 - S0263 - IS600 orfB 241 46.53 -1 267635..267937 - 100 30061814 is600a S0264 - IS600 orfA 242 55.19 0 268714..269619 - 301 161486542 yi22_6 S0266 - insertion element IS2 transposase InsD 243 53.01 0 269577..269942 - 121 161486541 yi21_6 S0267 - insertion sequence 2 OrfA protein 244 29.63 -2 270487..270756 + 89 30061817 - S0269 - hypothetical protein 245 53.77 0 270893..271900 + 335 30061818 hemB S0270 - delta-aminolevulinic acid dehydratase 246 54.58 0 272006..272857 - 283 30061819 tauD S0271 - taurine dioxygenase 247 58.33 +1 272854..273681 - 275 30061820 tauC S0272 - taurine transporter subunit 248 55.99 +1 273678..274445 - 255 30061821 tauB S0273 - taurine transporter ATP-binding subunit 249 56.52 +1 274458..275354 - 298 30061822 tauA S0274 - taurine transporter substrate binding subunit 250 52.98 0 275912..276415 - 167 30061823 - S0275 - IS1 orfB 251 52.90 0 276334..276609 - 91 30061824 - S0276 - IS1 orfA 252 37.22 -2 276754..277422 + 222 30061825 ykgH S0277 - hypothetical protein 253 42.25 -2 277498..277710 + 70 30061826 - S0278 - hypothetical protein 254 52.30 0 277665..278360 - 231 161486540 ykgG S0279 - putative transporter 255 50.42 0 278353..279780 - 475 30061828 ykgF S0280 - hypothetical protein 256 50.14 0 279791..280510 - 239 30061829 ykgE S0281 - putative dehydrogenase subunit 257 52.90 0 280929..281204 + 91 30061830 - S0282 - IS1 orfA 258 52.98 0 281123..281626 + 167 30061831 - S0283 - IS1 orfB 259 54.11 0 282704..284917 + 737 30061832 rhsG S0284 - putative Rhs-family protein 260 47.26 -1 284940..285140 + 66 30061833 - S0285 - cytoplasmic protein 261 48.68 0 285197..285385 + 62 30061834 - S0286 - putative cytoplasmic protein 262 54.17 0 285407..285814 + 135 30061835 - S0287 - putative Rhs-family protein 263 59.50 +1 285811..288099 + 762 30061836 rhsD S0288 - putative Rhs-family protein 264 56.36 +1 288096..289085 + 329 30061837 rhs-like S0289 - putative Rhs-family protein 265 55.12 0 290134..290904 - 256 30061838 yafV S0290 - hypothetical protein 266 50.42 0 291058..291531 + 157 30061839 ykfE S0291 - vertebrate C-lysozyme inhibitor 267 55.99 +1 291574..294018 - 814 161486539 fadE S0292 - acyl-CoA dehydrogenase 268 50.78 0 294258..294836 + 192 30061841 gmhA S0293 - phosphoheptose isomerase 269 53.65 0 295042..295809 + 255 30061842 yafJ S0294 - putative amidotransferase 270 49.26 0 295780..296520 - 246 30061843 yafK S0295 - hypothetical protein 271 54.95 0 296871..297425 + 184 30061844 yafL S0296 - putative lipoprotein 272 45.18 -1 297601..298098 + 165 30061845 yafM S0297 - hypothetical protein 273 58.39 +1 298315..300054 - 579 30061846 fhiA S0299 - flagellar biosynthetic protein FlhA 274 52.29 0 299999..300784 + 261 30061847 mbhA S0298 - hypothetical protein 275 53.88 0 300855..301910 + 351 30061848 dinP S0300 - DNA polymerase IV 276 41.16 -2 301962..302255 + 97 30061849 yafN S0301 - putative antitoxin of the YafO-YafN toxin-antitoxin system 277 43.36 -2 302258..302656 + 132 30061850 yafO S0302 - putative toxin YafO 278 42.83 -2 302666..303118 + 150 30061851 yafP S0303 - hypothetical protein 279 52.87 0 303364..304407 + 347 30061852 - S0304 - hypothetical protein 280 56.36 +1 304523..304978 + 151 30061853 prfH S0305 - peptide chain release factor 2 281 51.44 0 305140..306597 - 485 30061854 pepD S0306 - aminoacyl-histidine dipeptidase (peptidase D) 282 52.07 0 306859..307317 + 152 30061855 gpt S0307 - xanthine-guanine phosphoribosyltransferase 283 53.25 0 307409..308653 + 414 30061856 frsA S0308 - fermentation/respiration switch protein 284 50.00 0 308711..309112 + 133 30061857 crl S0309 - DNA-binding transcriptional regulator Crl 285 45.17 -1 309151..310206 - 351 30061858 phoE S0310 - outer membrane phosphoporin protein E 286 52.54 0 310382..310657 + 91 30061859 - S0311 - IS1 orfA 287 52.78 0 310576..311079 + 167 30061860 - S0312 - IS1 orfB 288 55.80 +1 311270..312373 + 367 30061861 proB S0313 - gamma-glutamyl kinase 289 54.31 0 312385..313638 + 417 30061862 proA S0314 - gamma-glutamyl phosphate reductase 290 46.48 -1 313843..315006 - 387 30061863 - S0316 - putative phage integrase 291 46.20 -1 315192..315494 + 100 30061864 - S0317 - IS600 orfA 292 52.24 0 315635..316348 + 237 30061865 - S0318 - IS600 orfB 293 50.69 0 316401..317051 + 216 30061866 - S0319 - hypothetical protein 294 40.69 -2 316960..317421 + 153 30061867 - S4801 - putative phage tail fibre protein 295 31.62 -2 318229..319278 - 349 30061868 - S4802 - hypothetical protein 296 45.17 -1 319729..320919 + 396 30061869 - S4808 - hypothetical protein 297 31.83 -2 321309..322769 - 486 30061870 gtrII S4803 - putative glucosyl tranferase II 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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