version 1.0
Shigella flexneri 2a str. 2457T, complete genome - 1..4599354 4061 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2268 49.84 0 2544794..2545744 + 316 30063844 talA S2657 - transaldolase A 2269 54.49 0 2545764..2547767 + 667 30063845 tktB S2658 - transketolase 2270 54.12 0 2547870..2548913 - 347 30063846 - S2659 - hypothetical protein 2271 48.09 0 2549039..2549614 - 191 30063847 yffH S2660 - hypothetical protein 2272 55.51 0 2549682..2551661 - 659 30063848 yffG S2661 - putative oxidoreductase Fe-S binding subunit 2273 54.24 0 2553786..2556899 + 1037 30063849 acrD S2663 - aminoglycoside/multidrug efflux system 2274 47.06 -1 2557438..2557794 + 118 30063850 yffB S2664 - hypothetical protein 2275 53.10 0 2557798..2558925 + 375 30063851 dapE S2665 - succinyl-diaminopimelate desuccinylase 2276 53.65 0 2559263..2559961 - 232 30063852 ypfH S2666 - esterase YpfH 2277 55.16 0 2560035..2562050 - 671 30063853 ypfI S2667 - hypothetical protein 2278 53.59 0 2562065..2562928 - 287 30063854 - S2668 - hypothetical protein 2279 52.10 0 2563096..2563809 - 237 30063855 purC S2669 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2280 55.36 0 2564022..2565056 - 344 30063856 nlpB S2670 - lipoprotein 2281 51.65 0 2565073..2565951 - 292 30063857 dapA S2671 - dihydrodipicolinate synthase 2282 49.26 0 2566669..2567139 + 156 30063858 bcp S2673 - thioredoxin-dependent thiol peroxidase 2283 56.80 +1 2567392..2568009 + 205 30063859 hyfA S2674 - hydrogenase 4 Fe-S subunit 2284 53.38 0 2570037..2570984 + 315 30063860 hyfC S2676 - hydrogenase 4 membrane subunit 2285 55.56 0 2571001..2572440 + 479 30063861 hyfD S2677 - hydrogenase 4 subunit D 2286 53.30 0 2572452..2573102 + 216 30063862 hyfE S2678 - hydrogenase 4 membrane subunit 2287 54.19 0 2573107..2574693 + 528 30063863 hyfF S2679 - hydrogenase 4 subunit F 2288 55.31 0 2576407..2576952 + 181 30063864 hyfH S2681 - hydrogenase 4 subunit H 2289 56.39 +1 2576949..2577707 + 252 30063865 hyfI S2682 - hydrogenase 4 Fe-S subunit 2290 51.99 0 2577637..2578113 + 158 30063866 - S2683 - putative protein processing element 2291 54.05 0 2581143..2582204 - 353 30063867 perM S2686 - putative permease 2292 54.17 0 2582417..2583880 + 487 30063868 - S2687 - hypothetical protein 2293 52.22 0 2583901..2584260 + 119 30063869 - S2688 - putative oxidoreductase 2294 53.15 0 2584393..2585139 - 248 30063870 - S2689 - DNA replication initiation factor 2295 51.86 0 2585189..2586478 - 429 30063871 uraA S2690 - uracil transporter 2296 53.11 0 2586564..2587190 - 208 30063872 upp S2691 - uracil phosphoribosyltransferase 2297 53.66 0 2587499..2588551 + 350 30063873 purM S2692 - phosphoribosylaminoimidazole synthetase 2298 53.52 0 2588551..2589189 + 212 30063874 purN S2693 - phosphoribosylglycinamide formyltransferase 2299 48.67 0 2589361..2591427 + 688 30063875 ppk S2694 - polyphosphate kinase 2300 51.04 0 2591432..2592973 + 513 30063876 ppx S2695 - exopolyphosphatase 2301 46.20 -1 2594187..2594489 + 100 30063877 - S2697 - IS600 orfA 2302 52.24 0 2594630..2595343 + 237 30063878 - S2698 - IS600 orfB 2303 48.96 0 2596873..2597064 + 63 30063879 - S2700 - hypothetical protein 2304 47.21 -1 2597375..2597893 + 172 30063880 - S2701 - putative outer membrane lipoprotein 2305 49.26 0 2597909..2598448 + 179 30063881 - S2702 - hypothetical protein 2306 60.78 +2 2598850..2599665 + 271 30063882 - S2703 - dihydropteroate synthase 2307 58.09 +1 2599752..2600054 + 100 30063883 - S2704 - phosphoglucosamine mutase 2308 60.78 +2 2600230..2601723 - 497 30063884 - S2705 - putative transposase 2309 60.89 +2 2601934..2602158 - 74 30063885 - S2706 - hypothetical protein 2310 67.48 +2 2602155..2602892 - 245 30063886 parA S2707 - resolvase 2311 62.16 +2 2603040..2603372 + 110 30063887 - S2708 - putative transcriptional regulator 2312 62.11 +2 2603369..2604136 + 255 30063888 - S2709 - putative arsenical resistance protein 2313 60.55 +2 2604133..2604639 + 168 30063889 - S2710 - arsenate reductase 2314 62.83 +2 2604636..2605703 + 355 30063890 - S2711 - putative sodium bile acid symporter family protein 2315 60.12 +2 2606599..2607087 - 162 30063891 - S2715 - hypothetical protein 2316 53.04 0 2607237..2608043 - 268 30063892 trbL S2716 - putative mating pair formation protein 2317 59.87 +2 2608282..2609061 - 259 30063893 trbJ S2718 - putative mating pair formation protein 2318 52.38 0 2609202..2609390 - 62 30063894 - S2719 - putative stabilization protein 2319 59.07 +1 2610423..2611304 - 293 30063895 repC S2720 - putative replication protein C 2320 55.68 +1 2611291..2612118 - 275 30063896 - S2721 - putative DNA helicase 2321 50.00 0 2612123..2612344 - 73 30063897 - S2722 - hypothetical protein 2322 58.02 +1 2612492..2613694 - 400 30063898 - S2723 - putative integrase 2323 53.99 0 2613999..2615576 - 525 30063899 guaA S2725 - bifunctional GMP synthase/glutamine amidotransferase protein 2324 54.33 0 2615645..2617111 - 488 30063900 guaB S2726 - inositol-5-monophosphate dehydrogenase 2325 53.25 0 2617273..2618643 + 456 30063901 xseA S2727 - exodeoxyribonuclease VII large subunit 2326 47.22 -1 2618640..2618891 - 83 30063902 - S2728 - hypothetical protein 2327 52.21 0 2618925..2620397 - 490 30063903 engA S2729 - GTP-binding protein EngA 2328 53.35 0 2620515..2621693 - 392 30063904 - S2730 - outer membrane protein assembly complex subunit YfgL 2329 49.92 0 2621704..2622324 - 206 30063905 - S2731 - hypothetical protein 2330 54.35 0 2622342..2623616 - 424 30063906 hisS S2732 - histidyl-tRNA synthetase 2331 53.19 0 2623719..2624846 - 375 30063907 ispG S2733 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2332 54.34 0 2624873..2625886 - 337 30063908 yfgA S2734 - hypothetical protein 2333 52.73 0 2626171..2627325 - 384 30063909 yfgB S2735 - hypothetical protein 2334 52.55 0 2627475..2627906 - 143 30063910 ndk S2736 - nucleoside diphosphate kinase 2335 57.81 +1 2630171..2631367 - 398 30063911 - S2738 - ISSfl4 orf 2336 47.23 -1 2632898..2633674 - 258 30063912 sseB S2741 - enhanced serine sensitivity protein SseB 2337 56.07 +1 2633816..2635099 - 427 30063913 pepB S2742 - aminopeptidase B 2338 50.75 0 2635158..2635358 - 66 30063914 yfhJ S2743 - hypothetical protein 2339 52.68 0 2635370..2635705 - 111 30063915 fdx S2744 - [2FE-2S] ferredoxin, electron carrer protein 2340 57.59 +1 2635707..2637557 - 616 30063916 hscA S2745 - chaperone protein HscA 2341 51.94 0 2637574..2638089 - 171 30063917 hscB S2746 - co-chaperone HscB 2342 50.62 0 2638185..2638508 - 107 30063918 iscA S2747 - iron-sulfur cluster assembly protein 2343 49.35 0 2638525..2638911 - 128 30063919 - S2748 - scaffold protein 2344 53.25 0 2638939..2640153 - 404 30063920 yfhO S2749 - cysteine desulfurase 2345 53.78 0 2640265..2640753 - 162 30063921 - S2750 - DNA-binding transcriptional regulator IscR 2346 54.79 0 2641023..2641763 - 246 30063922 - S2751 - putative ATP synthase beta subunit 2347 53.86 0 2641882..2642685 + 267 30063923 suhB S2752 - inositol monophosphatase 2348 50.41 0 2642830..2643684 + 284 30063924 - S2753 - putative enzyme 2349 51.44 0 2643875..2645155 + 426 30063925 csiE S2754 - stationary phase inducible protein CsiE 2350 56.40 +1 2645147..2646286 - 379 30063926 hcaT S2755 - putative 3-phenylpropionic acid transporter 2351 49.94 0 2646446..2647336 - 296 30063927 hcaR S2756 - DNA-binding transcriptional regulator HcaR 2352 53.08 0 2647472..2648833 + 453 30063928 hcaA1 S2757 - large terminal subunit of phenylpropionate dioxygenase 2353 52.79 0 2648830..2649348 + 172 30063929 hcaA2 S2758 - 3-phenylpropionate dioxygenase subunit beta 2354 55.45 0 2649348..2649668 + 106 30063930 hcaC S2759 - 3-phenylpropionate dioxygenase ferredoxin subunit 2355 56.09 +1 2649665..2650477 + 270 30063931 hcaB S2760 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2356 48.89 0 2651734..2652228 + 164 30063932 yphA S2762 - hypothetical protein 2357 55.10 0 2652276..2653148 - 290 30063933 yphB S2763 - hypothetical protein 2358 54.16 0 2653160..2654254 - 364 30063934 yphC S2764 - putative oxidoreductase 2359 55.26 0 2654287..2655285 - 332 30063935 yphD S2765 - putative transport system permease protein 2360 55.16 0 2655310..2656821 - 503 30063936 yphE S2766 - putative ATP-binding component of a transport system 2361 51.26 0 2661322..2662515 + 397 30063937 yphH S2769 - putative NAGC-like transcriptional regulator 2362 53.11 0 2662713..2663966 - 417 30063938 glyA S2770 - serine hydroxymethyltransferase 2363 52.39 0 2664293..2665483 + 396 30063939 hmpA S2771 - nitric oxide dioxygenase 2364 51.03 0 2665528..2665866 - 112 30063940 glnB S2772 - nitrogen regulatory protein P-II 1 2365 54.31 0 2665927..2667261 - 444 30063941 yfhA S2773 - putative 2-component transcriptional regulator 2366 54.34 0 2667251..2667964 - 237 30063942 yfhG S2774 - hypothetical protein 2367 52.38 0 2668129..2669619 - 496 30063943 yfhK S2775 - putative 2-component sensor protein 51.60 MEAN 4.04 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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